DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004736
GeneCir1
SynonymsCIR
Desc.corepressor interacting with RBPJ, 1
LocusNM_025854 chr2:73121929-73150649(-)
DB links


Entrez 66935
MGI 1914185
Ensembl ENSMUSG00000041777
Vega OTTMUSG00000013426
Featureprotein-coding
GO(BP)
  •   6 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      mRNA processing (GO:0006397)
      RNA splicing (GO:0008380)
      negative regulation of transcription, DNA-dependent (GO:0045892)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004654
(v2.0)
Cir1NM_02585466935
10.933113.927822.883223.25922.778618.88517.1458417.613918.678420.439
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004736
(v1.0)
Cir166935
MGA0.95127
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004654
(v2.0)
Cir166935
549/3820.0104432/3820.0611179/3822.4704502/3821.718822/382-2.0117122/382-2.232
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004654
(v2.0)
Cir166935
285/1860.1023189/186-0.0926167/1863.363446/1862.576910/186-2.053947/186-2.5459
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004654
(v2.0)
Cir166935
45.94113434.28
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004654
(v2.0)
Cir166935
16.581710216.26
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004736
(v1.0)
Cir1NM_02585466935
14.470615.854617.27915.78825.06331
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004736
(v1.0)
Cir1NM_02585466935
0.2683520.3055930.2130380.3096830.153105
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004736
(v1.0)
Cir1NM_02585466935
15.13033.9983617.2977
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004736
(v1.0)
Cir1NM_02585466935
14.768715.695413.0745
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004736
(v1.0)
Cir1NM_02585466935
0.3101810.363729
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004736
(v1.0)
Cir1NM_02585466935
15.13913.943614.3396
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004736
(v1.0)
Cir1NM_02585466935
15.997615.244112.987
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004736
(v1.0)
Cir1NM_02585466935
0.3063380.162611
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004736
(v1.0)
Cir1NM_02585466935
22.00598.62671
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004736
(v1.0)
Cir1NM_02585466935
26.316349.7568
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004736
(v1.0)
6584H3028G12-3Mm.229191700023B02Rik66935
U023068NAP093816-001TC805617,TC805616Q9DA19U,F3.99293.87693.56313.70984.27284.09514.1916
MOE430 N/A
Agilent44K N/A
Proteome N/A