DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004768
GeneClcc1
SynonymsMclc
Desc.chloride channel CLIC-like 1
LocusNM_145543 chr3:108456831-108481758(+)
NM_001177771 chr3:108456858-108481758(+)
NM_001177770 chr3:108456908-108480929(+)
DB links


Entrez 229725
MGI 2385186
Ensembl ENSMUSG00000027884
Vega OTTMUSG00000007251
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004688
(v2.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
9.48692154.31276.68716.25222.448910.700219.141782.562925.238911.5822
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004768
(v1.0)
Clcc1229725
Maternal RNA0.91807
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004688
(v2.0)
Clcc1229725
623/3820.1924427/3820.044370/3821.1283185/3820.283569/382-0.406393/382-0.5566
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004688
(v2.0)
Clcc1229725
289/1470.4598191/1470.259964/1472.3093168/1471.50814/147-1.275374/147-1.5701
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004688
(v2.0)
Clcc1229725
58.732611750.2
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004688
(v2.0)
Clcc1229725
16.38827222.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
160.33353.193712.100215.521313.5514
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
214.92165.119615.248721.054117.4088
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
167.6433.4695458.0355
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
163.63652.659661.2562
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
66.118774.2819
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
167.743.4220267.1837
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
11.202914.986517.5657
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
20.827123.6674
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
222.04814.0704
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004768
(v1.0)
Clcc1NM_001177770,NM_001177771,NM_145543229725
16.974628.5826
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004768
(v1.0)
8630H3069C03-3LOC229725229725
U003743NAP001950-001TC869458Q99LI2U,F,22.35492.55482.4552.20532.15172.09992.1459
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004768
(v1.0)
1425200_atMm.214545Clcc1NM_001177770.1,NM_001177771.1,NM_145543.2229725
196.625203.5124.92500
0004768
(v1.0)
1436390_a_atMm.214545Clcc1NM_001177770.1,NM_001177771.1,NM_145543.2229725
608.75117.5159.684.57540.825
0004768
(v1.0)
1437511_x_atMm.214545Clcc1NM_001177770.1,NM_001177771.1,NM_145543.2229725
811.475176.55149.65108.6541.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004768
(v1.0)
A_51_P427099MGI:2385186NM_145543229725
11P0.5230.173P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004768
(v1.0)
Clcc1229725
112112