DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004843
GeneClint1
SynonymsEpn4
Desc.clathrin interactor 1
LocusNM_001045520 chr11:45665466-45724127(+)
DB links


Entrez 216705
MGI 2144243
Ensembl ENSMUSG00000006169
Vega OTTMUSG00000005479
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004764
(v2.0)
Clint1NM_001045520216705
51.064634.241623.347918.932925.485615.383949.911616.016925.741514.2939
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004843
(v1.0)
Clint1216705
Maternal RNA0.91141
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004764
(v2.0)
Clint1216705
701/3970.3068436/3970.0189145/3972.1145402/3971.3438130/3970.4432661/3970.1358
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004764
(v2.0)
Clint1216705
342/1370.8025215/1370.5307132/1373.4359342/1372.629135/1370.0865193/137-0.1041
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004764
(v2.0)
Clint1216705
65.400612552.32
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004764
(v2.0)
Clint1216705
17.12216028.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004843
(v1.0)
Clint1NM_001045520216705
35.598816.165814.076617.642535.4562
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004843
(v1.0)
Clint1NM_001045520216705
62.430821.492622.763929.442956.672
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004843
(v1.0)
Clint1NM_001045520216705
37.221818.674817.6372
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004843
(v1.0)
Clint1NM_001045520216705
36.332216.003411.88
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004843
(v1.0)
Clint1NM_001045520216705
136.7588.4505
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004843
(v1.0)
Clint1NM_001045520216705
37.243518.419113.0296
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004843
(v1.0)
Clint1NM_001045520216705
13.032817.034617.8674
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004843
(v1.0)
Clint1NM_001045520216705
57.089472.0086
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004843
(v1.0)
Clint1NM_001045520216705
72.8054.39379
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004843
(v1.0)
Clint1NM_001045520216705
12.90918.3592
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004843
(v1.0)
4996G0118E10-3Mm.24036KIAA0171216705
U012498NAP005723-001TC924407Q99KN9U,F3.7283.61182.91713.10922.87893.02513.0429
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004843
(v1.0)
1452152_atMm.169673Clint1NM_001045520.3216705
918.575573.425209.025174.85512.775
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004843
(v1.0)
Clint1216705
4.51.25161.52