DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004844
GeneClip1
SynonymsClip 170
CLIP-170
Clip50
cytoplasmic linker protein 50
restin
Rsn
Desc.CAP-GLY domain containing linker protein 1
LocusNM_019765 chr5:124029079-124134300(-)
DB links


Entrez 56430
MGI 1928401
Ensembl ENSMUSG00000049550
Vega OTTMUSG00000025900
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004765
(v2.0)
Clip1NM_001291229,NM_01976556430
14.543226.003141.913116.483814.31463.2646820.644339.905512.18822.86657
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004844
(v1.0)
Clip156430
Minor ZGA0.97758
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004765
(v2.0)
Clip156430
740/3840.4326414/384-0.007788/3841.447217/3840.5051122/3840.3998771/3840.4054
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004765
(v2.0)
Clip156430
434/1770.7777227/1770.241584/1772.4472195/1771.45859/1770.4635369/1770.4583
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004765
(v2.0)
Clip156430
51.323712740.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004765
(v2.0)
Clip156430
11.09668313.37
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004844
(v1.0)
Clip1NM_01976556430
29.649132.30214.824511.790716.2692
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004844
(v1.0)
Clip1NM_01976556430
78.948784.898822.260922.184342.33
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004844
(v1.0)
Clip1NM_01976556430
31.00085.7387835.2422
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004844
(v1.0)
Clip1NM_01976556430
30.259931.977734.9129
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004844
(v1.0)
Clip1NM_01976556430
164.412333.058
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004844
(v1.0)
Clip1NM_01976556430
31.01885.6601738.2913
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004844
(v1.0)
Clip1NM_01976556430
13.725211.384410.4396
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004844
(v1.0)
Clip1NM_01976556430
104.054157.86
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004844
(v1.0)
Clip1NM_01976556430
29.583112.6369
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004844
(v1.0)
Clip1NM_01976556430
1.983434.36816
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004844
(v1.0)
7470H3048F12-3Mm.227279Rsn56430
U026717NAP093383-001Rsn;TC935583U,F3.3063.31353.1663.12122.94363.04553.0472
0004844
(v1.0)
16716K0445F10-3Mm.227279Rsn56430
U026717NAP056436-1Rsn;TC935592,TC935583U,F2.77282.91662.81312.91182.44112.54512.502
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004844
(v1.0)
1425060_s_atMm.241109Clip1NM_019765.456430
18.526.8517.6519.77511
0004844
(v1.0)
1452929_atMm.241109Clip1NM_019765.456430
310.8251.9186.925151.925101.675
0004844
(v1.0)
1431098_atMm.241109Clip1NM_019765.456430
0161.6000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004844
(v1.0)
A_51_P288906RsnNM_01976556430
11P0.6990.18P
Proteome N/A