DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004849
GeneClk2
Synonyms
Desc.CDC-like kinase 2
LocusNM_007712 chr3:88968727-88981009(+)
NM_001163432 chr3:88968727-88981009(+)
DB links


Entrez 12748
MGI 1098669
Ensembl ENSMUSG00000068917
Vega OTTMUSG00000029741
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004770
(v2.0)
Clk2NM_001163432,NM_00771212748
10.94853.867592.144528.14113.912916.494613.196879.061515.211317.2879
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004849
(v1.0)
Clk212748
Minor ZGA0.99529
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004770
(v2.0)
Clk212748
701/3870.3435437/3870.0589261/3872.9938871/3872.493951/387-0.8534420/387-0.4798
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004770
(v2.0)
Clk212748
282/1580.3211213/1580.3129225/1584.0107689/1583.43522/158-3.698655/158-2.0917
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004770
(v2.0)
Clk212748
94.092916955.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004770
(v2.0)
Clk212748
12.60316220.33
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004849
(v1.0)
Clk2NM_001163432,NM_00771212748
56.00563.618620.94869.634059.34289
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004849
(v1.0)
Clk2NM_001163432,NM_007712,NM_01188612748
222.848195.525100.51193.023890.7826
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004849
(v1.0)
Clk2NM_001163432,NM_00771212748
58.55834.0038769.4093
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004849
(v1.0)
Clk2NM_001163432,NM_00771212748
57.158762.979858.661
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004849
(v1.0)
Clk2NM_001163432,NM_00771212748
181.156452.605
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004849
(v1.0)
Clk2NM_001163432,NM_00771212748
58.59243.9490364.3374
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004849
(v1.0)
Clk2NM_001163432,NM_00771212748
19.39519.3020610.5499
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004849
(v1.0)
Clk2NM_001163432,NM_007712,NM_01188612748
135.609185.495
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004849
(v1.0)
Clk2NM_001163432,NM_00771212748
119.39823.294
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004849
(v1.0)
Clk2NM_001163432,NM_00771212748
42.037440.4797
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004849
(v1.0)
17964L0039A09-3Mm.18268Clk212748
U003453NAP034137-1Clk2;TC800527,TC800526O35491U,F4.15694.19263.75163.78383.38293.57033.414
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004849
(v1.0)
1417743_atMm.288098Clk2NM_007712.3,NM_001163432.112748
326.925723.575197.3181.975106.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004849
(v1.0)
A_51_P363948Clk2NM_00771212748
11P0.7390.208P
0004849
(v1.0)
A_52_P41894Clk2NM_00771212748
11P0.5840.124P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004849
(v1.0)
Clk212748
232234