DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004877
GeneCltc
SynonymsCHC
Desc.clathrin, heavy polypeptide (Hc)
LocusNM_001003908 chr11:86508155-86570994(-)
DB links


Entrez 67300
MGI 2388633
Ensembl ENSMUSG00000047126
Vega OTTMUSG00000001209
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   5 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004799
(v2.0)
CltcNM_00100390867300
73.392997.2265105.41461.25465.700464.3634159.97870.449160.843553.9035
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004877
(v1.0)
Cltc67300
Maternal RNA0.99611
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004799
(v2.0)
Cltc67300
730/4280.2569512/4280.142638/4284.13891850/4283.435431/428-1.6976213/428-1.5992
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004799
(v2.0)
Cltc67300
394/1950.4997222/1950.0705585/1955.10141378/1954.13494/195-3.258152/195-2.4722
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004799
(v2.0)
Cltc67300
32.791514922.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004799
(v2.0)
Cltc67300
7.16961215.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004877
(v1.0)
CltcNM_00100390867300
101.04672.607945.542945.5907111.063
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004877
(v1.0)
CltcFR115542,FR240606,FR274308,NM_00100390867300
488.989379.569236.82252.582548.81
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004877
(v1.0)
CltcNM_00100390867300
105.65326.840579.2168
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004877
(v1.0)
CltcNM_00100390867300
103.12871.878952.1256
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004877
(v1.0)
CltcFR115542,FR240606,FR274308,NM_00100390867300
766.494538.285
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004877
(v1.0)
CltcNM_00100390867300
105.71426.472957.1696
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004877
(v1.0)
CltcNM_00100390867300
42.165744.019642.0055
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004877
(v1.0)
CltcFR115542,FR240606,FR274308,NM_00100390867300
344.669313.031
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004877
(v1.0)
CltcNM_00100390867300
25.304334.6915
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004877
(v1.0)
CltcNM_00100390867300
3.1014212.1201
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004877
(v1.0)
3607C0832C12-3Mm.214732U033227NAP015416-001Cltc;TC813871U,F,22.1012.41682.52092.34722.1572.57862.6651
0004877
(v1.0)
5986H3014D01-3Mm.200876Cltc67300
U033227NAP004156-002Cltc;TC813868,TC813867U,F,22.94023.07873.08872.85692.95882.95073.1539
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004877
(v1.0)
1454626_atMm.479526CltcNM_001003908.167300
681.025766.425567.775418.81230.625
0004877
(v1.0)
1439094_atMm.479526CltcNM_001003908.167300
0000228.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004877
(v1.0)
A_52_P3835CltcNM_00100390867300
11P0.6010.235P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004877
(v1.0)
Cltc67300
67882919731860