DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004910
GeneCnbp
SynonymsZnf9
Desc.cellular nucleic acid binding protein
LocusNM_001109746 chr6:87792609-87801100(-)
NM_001109745 chr6:87792609-87801100(-)
NM_013493 chr6:87792609-87801100(-)
DB links


Entrez 12785
MGI 88431
Ensembl ENSMUSG00000030057
Vega OTTMUSG00000023465
Featureprotein-coding
GO(BP)
  •   5 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      positive regulation of cell proliferation (GO:0008284)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004835
(v2.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
102.342103.559109.011298.324752.566561.275180.28597.66600.104625.856
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004910
(v1.0)
Cnbp12785
MGA0.98049
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004835
(v2.0)
Cnbp12785
763/3940.4397556/3940.3798722/3944.43312261/3943.843460/394-0.6487456/394-0.3874
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004835
(v2.0)
Cnbp12785
444/1710.86327/1710.8155676/1715.48731870/1714.76212/171-1.6943124/171-1.0539
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004835
(v2.0)
Cnbp12785
39.041710039.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004835
(v2.0)
Cnbp12785
13.88887418.77
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
107.58275.408222.164522.554128.815
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
445.535369.812913.3761962.09463.188
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
112.48737.427382.2718
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
109.79974.650872.3943
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
406.076689.801
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
112.55336.914779.3996
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
205.689504.547414.912
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
803.037645.478
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
158.58386.919
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004910
(v1.0)
CnbpNM_001109745,NM_001109746,NM_01349312785
128.174157.811
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004910
(v1.0)
1438C0211C09-3Mm.7335Cnbp12785
2.54892.58792.63572.56442.59622.58452.562
0004910
(v1.0)
17878L0027F12-3Mm.7335Cnbp12785
U027586NAP008073-001Cnbp;TC891635,TC853320,TC853317P53996U,F,23.56153.22993.31643.79543.153.45363.0638
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004910
(v1.0)
1416244_a_atMm.290251CnbpNM_013493.3,NM_001109745.1,NM_001109746.112785
1695.1252608.5752074.2257012.152904.75
0004910
(v1.0)
1437850_a_atMm.290251CnbpNM_013493.3,NM_001109745.1,NM_001109746.112785
404.1640.05685.3251633.825567.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004910
(v1.0)
A_51_P448203Cnbp1NM_01349312785
11P0.7020.175P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004910
(v1.0)
Cnbp12785
110110