DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004936
GeneCnot2
Synonyms
Desc.CCR4-NOT transcription complex, subunit 2
LocusNM_001037847 chr10:115922217-116018567(-)
NR_024327 chr10:115922217-116018567(-)
NM_028082 chr10:115922217-116018567(-)
NM_001037846 chr10:115922217-116018567(-)
NM_001037848 chr10:115946847-116018567(-)
DB links


Entrez 72068
MGI 1919318
Ensembl ENSMUSG00000020166
Vega OTTMUSG00000035217
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004863
(v2.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_028082,NR_02432772068
13.158366.202117.83649.615466.00130.158322.888897.392451.583433.3206
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004936
(v1.0)
Cnot272068
1-Cell Transient0.97706
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004863
(v2.0)
Cnot272068
680/3580.4118483/3580.3151161/3582.409430/3581.588911/358-2.8577118/358-2.1861
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004863
(v2.0)
Cnot272068
409/1421.0083257/1420.7356152/1423.5904413/1422.84973/142-3.133770/142-1.599
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004863
(v2.0)
Cnot272068
62.763114842.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004863
(v2.0)
Cnot272068
13.97139614.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_02808272068
68.027381.046236.876644.706815.8092
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_028082,NR_02432772068
125.726150.25171.926599.016235.8519
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_02808272068
71.12884.7663188.4232
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_02808272068
69.428780.232471.6734
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_028082,NR_02432772068
483.165496.574
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_02808272068
71.17014.7010278.6089
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_02808272068
34.14243.166235.2984
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_028082,NR_02432772068
110.08585.5094
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_02808272068
81.324629.0388
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004936
(v1.0)
Cnot2NM_001037846,NM_001037847,NM_001037848,NM_02808272068
17.439323.9447
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004936
(v1.0)
7226H3044F02-3Cnot272068
U032242NAP093715-001Cnot2;TC891845,TC891837Q9D0P1U,F,23.65563.58033.73893.57664.23373.93214.1797
0004936
(v1.0)
8088H3059F07-3Mm.22533Cnot272068
U032242NAP037560-1Cnot2;TC891846Q9D0P1U,F,22.79032.66572.64582.54372.90272.70312.7278
0004936
(v1.0)
9081H3076C02-3Mm.22533Cnot272068
U032242NAP107838-1Cnot2;TC891841Q9D0P1U,F,23.98114.30874.62424.34083.85314.22723.9621
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004936
(v1.0)
1454603_a_atMm.351553Cnot2NM_001037846.3,NM_001037847.2,NM_028082.2,NM_001037848.372068
346.2388.275420.0750233.45
0004936
(v1.0)
1436980_x_atMm.351553Cnot2NM_001037846.3,NM_001037847.2,NM_028082.2,NM_001037848.372068
954.05722.975728.65620682.35
0004936
(v1.0)
1456576_x_atMm.351553Cnot2NM_001037846.3,NM_001037847.2,NM_028082.2,NM_001037848.372068
808.95493.9655.4446.15388.275
0004936
(v1.0)
1445017_atMm.351553Cnot2NM_001037846.3,NM_001037847.2,NM_028082.2,NM_001037848.372068
97.90116.90125.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004936
(v1.0)
A_51_P201520Cnot2BC06310572068
11P0.7420.207P
0004936
(v1.0)
A_52_P12604Cnot2NM_02808272068
11P0.3510.0892P
0004936
(v1.0)
A_52_P569038Cnot2BC06310572068
11P0.6690.155P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004936
(v1.0)
Cnot272068
211311