DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004939
GeneCnot6
Synonyms
Desc.CCR4-NOT transcription complex, subunit 6
LocusNM_212484 chr11:49488212-49526212(-)
DB links


Entrez 104625
MGI 2144529
Ensembl ENSMUSG00000020362
Vega OTTMUSG00000005565
Featureprotein-coding
GO(BP)
  •   3 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      positive regulation of ligand-dependent nuclear receptor transcription coactivator activity (GO:2000327)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004866
(v2.0)
Cnot6NM_001290741,NM_212484104625
8.828719.8234118.230714.395616.841513.506639.337412.385313.30710.4321
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004939
(v1.0)
Cnot6104625
Minor ZGA0.99686
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004866
(v2.0)
Cnot6104625
699/3880.3356403/388-0.0613111/3881.7641230/3880.573848/388-0.9428324/388-0.8564
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004866
(v2.0)
Cnot6104625
391/1670.7111180/167-0.008103/1672.8166210/1671.647124/167-0.7176147/167-0.7772
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004866
(v2.0)
Cnot6104625
75.634217543.22
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004866
(v2.0)
Cnot6104625
29.577712623.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004939
(v1.0)
Cnot6NM_212484104625
17.821720.649118.443217.521433.044
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004939
(v1.0)
Cnot6NM_212484104625
94.44497.2274107.719101.063127.143
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004939
(v1.0)
Cnot6NM_212484104625
18.63434.364222.5287
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004939
(v1.0)
Cnot6NM_212484104625
18.188920.441816.5261
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004939
(v1.0)
Cnot6NM_212484104625
101.58114.207
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004939
(v1.0)
Cnot6NM_212484104625
18.64514.3044318.1253
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004939
(v1.0)
Cnot6NM_212484104625
17.075516.917614.0801
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004939
(v1.0)
Cnot6NM_212484104625
210.313102.178
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004939
(v1.0)
Cnot6NM_212484104625
14.24688.50574
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004939
(v1.0)
Cnot6NM_212484104625
5.238227.56778
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004939
(v1.0)
1426682_atMm.247113Cnot6NM_212484.1104625
85.373.3582.4203.9200.875
0004939
(v1.0)
1426683_atMm.247113Cnot6NM_212484.1104625
184.275305.575348.775167.7203.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004939
(v1.0)
A_51_P449911Cnot6BC037217104625
11P1.5920.135P
Proteome N/A