DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004948
GeneCnpy4
Synonyms
Desc.canopy 4 homolog (zebrafish)
LocusNM_178612 chr5:138628763-138635122(+)
DB links


Entrez 66455
MGI 1913705
Ensembl ENSMUSG00000036968
Vega OTTMUSG00000022707
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004875
(v2.0)
Cnpy4NM_17861266455
6.1925386.970785.77820.3229.732568.5519917.903955.481212.21127.78752
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004948
(v1.0)
Cnpy466455
Maternal RNA0.992
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004875
(v2.0)
Cnpy466455
686/514-0.0962395/514-0.495119/5141.4687227/5140.151512/514-3.259118/514-2.7067
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004875
(v2.0)
Cnpy466455
251/194-0.1404140/194-0.5831102/1942.6001209/1941.4274/194-3.250846/194-2.6364
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004875
(v2.0)
Cnpy466455
99.908615265.73
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004875
(v2.0)
Cnpy466455
19.62316928.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004948
(v1.0)
Cnpy4NM_17861266455
90.389659.553215.13436.733112.6198
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004948
(v1.0)
Cnpy4NM_17861266455
298.853240.27648.664119.119346.8713
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004948
(v1.0)
Cnpy4NM_17861266455
94.51062.2646764.9738
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004948
(v1.0)
Cnpy4NM_17861266455
92.251758.955241.2449
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004948
(v1.0)
Cnpy4NM_17861266455
244.491187.638
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004948
(v1.0)
Cnpy4NM_17861266455
94.56562.2336545.236
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004948
(v1.0)
Cnpy4NM_17861266455
14.0126.501088.55199
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004948
(v1.0)
Cnpy4NM_17861266455
102.01854.5196
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004948
(v1.0)
Cnpy4NM_17861266455
122.90433.6976
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004948
(v1.0)
Cnpy4NM_17861266455
46.891628.8832
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004948
(v1.0)
6073H3015G04-3Mm.245922610019P18Rik66455
U006338NAP003711-001TC887883U,F,23.94124.11733.54413.30722.80573.00312.8648
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004948
(v1.0)
1428325_atMm.24592Cnpy4NM_178612.466455
6902.19288.73272.025580.125707.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004948
(v1.0)
A_51_P2431942610019P18RikNM_17861266455
11P0.7110.181P
0004948
(v1.0)
A_52_P1614002610019P18RikNM_17861266455
11P0.5820.116P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004948
(v1.0)
Cnpy466455
2532114