DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004954
GeneCntf
Synonyms
Desc.ciliary neurotrophic factor
LocusNM_170786 chr19:12838018-12840122(-)
DB links


Entrez 12803
MGI 88439
Ensembl ENSMUSG00000079415
Vega OTTMUSG00000024775
Featureprotein-coding
GO(BP)
  •   24 Terms
GO(MF)
GO(CC)
KEGG
  •   2 Terms
      Cytokine-cytokine receptor interaction (mmu04060)
      Jak-STAT signaling pathway (mmu04630)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004881
(v2.0)
CntfNM_053009,NM_170786,NR_02409312803
35.495938.033672.469757.22853.017223.267432.380553.155244.360821.9826
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004954
(v1.0)
CntfMinor ZGA0.87943
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004881
(v2.0)
Cntf12803
732/3560.5259560/3560.5361586/3564.27421858/3563.705715/356-2.4347170/356-1.6569
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004881
(v2.0)
Cntf12803
461/1511.0923277/1510.7552509/1515.24551363/1514.48272/151-3.634961/151-1.8811
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004881
(v2.0)
Cntf12803
54.35085795.35
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004881
(v2.0)
Cntf12803
27.83962996
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004954
(v1.0)
CntfNM_053009,NM_17078612803
39.529550.104242.595136.947222.8357
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004954
(v1.0)
CntfNM_053009,NM_170786,NR_02409312803
224.342252.99323.676277.777108.671
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004954
(v1.0)
CntfNM_053009,NM_17078612803
41.331713.053954.6647
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004954
(v1.0)
CntfNM_053009,NM_17078612803
40.343849.601139.4102
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004954
(v1.0)
CntfNM_053009,NM_170786,NR_02409312803
2310.35968.179
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004954
(v1.0)
CntfNM_053009,NM_17078612803
41.355712.875143.2238
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004954
(v1.0)
CntfNM_053009,NM_17078612803
39.436435.67430.55
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004954
(v1.0)
CntfNM_053009,NM_170786,NR_02409312803
911.569920.438
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004954
(v1.0)
CntfNM_053009,NM_17078612803
23.331320.583
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004954
(v1.0)
8659H3069F09-3Cntf12803
U038856NAP081281-1Cntf;Zfp91;TC915771,TC915723,TC796920P51642U,F,24.24384.29693.8044.23993.48513.97883.9821
0004954
(v1.0)
16483K0423B04-3Mm.212863Cntf12803
U038856NAP099188-001Cntf;Zfp91;TC865467,TC796920P51642U,F,22.78392.7552.74822.95352.79932.7782.7622
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004954
(v1.0)
A_51_P378967CntfNM_05300712803
11P2.0810.109P
Proteome N/A