DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005036
GeneCommd1
SynonymsMurr1
Desc.COMM domain containing 1
LocusNM_144514 chr11:22799728-22882284(-)
DB links


Entrez 17846
MGI 109474
Ensembl ENSMUSG00000051355
Vega OTTMUSG00000005270
Featureprotein-coding
GO(BP)
  •   5 Terms
      cellular copper ion homeostasis (GO:0006878)
      positive regulation of protein ubiquitination (GO:0031398)
      negative regulation of NF-kappaB transcription factor activity (GO:0032088)
      regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032434)
      copper ion homeostasis (GO:0055070)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004967
(v2.0)
Commd1NM_14451417846
31.2789145.77252.14296.3826721.67796.365673.030933.196825.3224106.366
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005036
(v1.0)
Commd117846
Maternal RNA0.97575
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004967
(v2.0)
Commd117846
608/4030.0803413/403-0.080672/4031.0935196/4030.289740/403-1.2541300/403-1.0215
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004967
(v2.0)
Commd117846
282/1600.3031165/160-0.071366/1602.2398171/1601.41313/160-3.301255/160-2.1097
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004967
(v2.0)
Commd117846
50.987312142.14
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004967
(v2.0)
Commd117846
13.07647517.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005036
(v1.0)
Commd1NM_14451417846
151.51636.14244.758514.973451.5892
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005036
(v1.0)
Commd1NM_14451417846
213.82358.0636.6623721.030667.9444
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005036
(v1.0)
Commd1NM_14451417846
158.42411.43939.4321
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005036
(v1.0)
Commd1NM_14451417846
154.63835.779524.5787
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005036
(v1.0)
Commd1NM_14451417846
74.024547.782
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005036
(v1.0)
Commd1NM_14451417846
158.51611.282326.957
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005036
(v1.0)
Commd1NM_14451417846
4.4056314.457417.6459
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005036
(v1.0)
Commd1NM_14451417846
17.293420.7363
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005036
(v1.0)
Commd1NM_14451417846
18.33770.153577
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005036
(v1.0)
Commd1NM_14451417846
13.776111.2325
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005036
(v1.0)
12211H3137G06-3Murr117846
U032567NAP023523-001B3gnt1;Murr1;TC921584,TC815202Q91V18U2.85892.9082.88442.76233.13672.88353.1648
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005036
(v1.0)
1424121_atMm.451238Commd117846
489.275106.1534.22598.475262.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005036
(v1.0)
A_51_P218205Commd1NM_14451417846
11P0.4920.0889P
0005036
(v1.0)
A_52_P353198Commd1NM_14451417846
11P0.6240.216P
Proteome N/A