DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005040
GeneCommd4
Synonyms
Desc.COMM domain containing 4
LocusNM_025417 chr9:57002848-57006106(-)
DB links


Entrez 66199
MGI 1913449
Ensembl ENSMUSG00000032299
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004971
(v2.0)
Commd4NM_02541766199
37.71796.118525.01210.782918.7884100.16738.48133.3356735.7653135.761
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005040
(v1.0)
Commd466199
MGA0.98924
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004971
(v2.0)
Commd466199
627/504-0.1974408/504-0.420172/5040.7793156/504-0.358691/504-0.4078761/504-0.0049
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004971
(v2.0)
Commd466199
268/199-0.0829158/199-0.446463/1991.879138/1990.795538/199-0.3233221/199-0.4454
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004971
(v2.0)
Commd466199
56.947611250.85
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004971
(v2.0)
Commd466199
23.77277531.7
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005040
(v1.0)
Commd4NM_02541766199
6.360423.501298.0440912.992227.3517
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005040
(v1.0)
Commd4FR311481,NM_02541766199
30.341515.344821.05756.148474.1577
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005040
(v1.0)
Commd4NM_02541766199
6.650413.79383.81999
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005040
(v1.0)
Commd4NM_02541766199
6.491453.466142.47892
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005040
(v1.0)
Commd4FR311481,NM_02541766199
9.650273.9841
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005040
(v1.0)
Commd4NM_02541766199
6.6542613.60492.7188
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005040
(v1.0)
Commd4NM_02541766199
7.4475712.544524.7738
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005040
(v1.0)
Commd4FR311481,NM_02541766199
35.368158.5
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005040
(v1.0)
Commd4NM_02541766199
0.2836144.91941
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005040
(v1.0)
2070C0288C05-3Mm.416871110039H05Rik66199
U030916NAP033081-11110039H05Rik;TC826125,TC826121,TC826119Q9CQ021.99312.21512.41672.70762.44252.54542.8799
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005040
(v1.0)
1417006_atMm.41687Commd4NM_025417.266199
167.175123119236.85511.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005040
(v1.0)
A_51_P353592Commd4NM_02541766199
11P0.9220.604P
Proteome N/A