DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005041
GeneCommd5
SynonymsD15Ertd81e
Hcarg
Desc.COMM domain containing 5
LocusNM_025536 chr15:76730371-76731727(+)
DB links


Entrez 66398
MGI 1913648
Ensembl ENSMUSG00000055041
Vega OTTMUSG00000023726
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004972
(v2.0)
Commd5NM_02553666398
16.30093.893944.3365651.0694125.08735.207724.95914.45126101.08342.6451
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005041
(v1.0)
Commd566398
MGA0.99591
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004972
(v2.0)
Commd566398
712/4880.0321378/488-0.4835191/4882.2199515/4881.404413/488-3.0779112/488-2.7063
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004972
(v2.0)
Commd566398
331/2080.1567169/208-0.413550/2081.4913180/2081.11332/208-4.086353/208-2.5381
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004972
(v2.0)
Commd566398
55.292118430.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004972
(v2.0)
Commd566398
26.14437833.52
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005041
(v1.0)
Commd5NM_02553666398
4.047053.0269337.974986.503117.5256
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005041
(v1.0)
Commd5NM_02553666398
3.409972.2465830.001168.968314.4562
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005041
(v1.0)
Commd5NM_02553666398
4.231565.961413.30244
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005041
(v1.0)
Commd5NM_02553666398
4.130432.996533.31778
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005041
(v1.0)
Commd5NM_02553666398
3.327863.72
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005041
(v1.0)
Commd5NM_02553666398
4.234025.879763.63883
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005041
(v1.0)
Commd5NM_02553666398
35.158883.522270.1097
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005041
(v1.0)
Commd5NM_02553666398
68.22557.0385
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005041
(v1.0)
Commd5NM_02553666398
0.76462219.6111
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005041
(v1.0)
Commd5NM_02553666398
2.105565.97526
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005041
(v1.0)
13554J0053G06-3Mm.27033Hcarg-pending66398
U016386NAP008612-001Hcarg;TC931560,TC931558,TC931557Q9D6R83.28333.17883.61693.93353.78063.92773.8584
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005041
(v1.0)
1449694_s_atMm.291716Commd5NM_025536.266398
0069.725138.475120.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005041
(v1.0)
A_51_P430485Commd5NM_02553666398
11P0.710.181P
Proteome N/A