DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005042
GeneCommd6
Synonyms
Desc.COMM domain containing 6
LocusNM_001168592 chr14:102032983-102039688(-)
NM_001033132 chr14:102032983-102039688(-)
DB links


Entrez 66200
MGI 1913450
Ensembl ENSMUSG00000075486
Vega OTTMUSG00000033464
Featureprotein-coding
GO(BP)
  •   1 Terms
      negative regulation of NF-kappaB transcription factor activity (GO:0032088)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004973
(v2.0)
Commd6NM_001033132,NM_00116859266200
21.80434.587094.492776.098147.974154.338664.245724.701346.718115.24533
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005042
(v1.0)
Commd666200
MGA0.99514
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004973
(v2.0)
Commd666200
520/376-0.0449396/376-0.041385/3761.4269178/3760.250978/376-0.2089407/376-0.4835
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004973
(v2.0)
Commd666200
214/1460.0386154/146-0.03980/1462.6359155/1461.402217/146-1.002775/146-1.5414
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004973
(v2.0)
Commd666200
60.836511254.32
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004973
(v2.0)
Commd666200
16.76226525.79
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005042
(v1.0)
Commd6NM_001033132,NM_00116859266200
4.763443.091134.527885.532483.05991
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005042
(v1.0)
Commd6FR064270,FR081780,FR301784,NM_001033132,NM_00116859266200
7.833034.606397.093218.712075.528
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005042
(v1.0)
Commd6NM_001033132,NM_00116859266200
4.980617.974053.37249
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005042
(v1.0)
Commd6NM_001033132,NM_00116859266200
4.861573.060093.45189
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005042
(v1.0)
Commd6FR064270,FR081780,FR301784,NM_001033132,NM_00116859266200
4.679194.61184
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005042
(v1.0)
Commd6NM_001033132,NM_00116859266200
4.983517.864843.78592
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005042
(v1.0)
Commd6NM_001033132,NM_00116859266200
4.192115.341834.6532
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005042
(v1.0)
Commd6FR064270,FR081780,FR301784,NM_001033132,NM_00116859266200
8.6186.86677
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005042
(v1.0)
Commd6NM_001033132,NM_00116859266200
0.6822417.16265
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005042
(v1.0)
Commd6NM_001033132,NM_00116859266200
4.669878.17818
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005042
(v1.0)
1435863_atMm.250474Commd6NM_001033132.3,NM_001168592.166200
44.200060.675
Agilent44K N/A
Proteome N/A