DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005050
GeneCopb1
SynonymsCopb1
Desc.coatomer protein complex, subunit beta 1
LocusNM_033370 chr7:121359073-121398194(-)
DB links


Entrez 70349
MGI 1917599
Ensembl ENSMUSG00000030754
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004981
(v2.0)
Copb1NM_03337070349
26.757984.600359.142711.096822.482924.18965.993529.140925.637923.6496
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005050
(v1.0)
Copb170349
Maternal RNA0.96553
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004981
(v2.0)
Copb170349
537/3270.2022429/3270.2747109/3271.9767230/3270.818820/327-1.9213130/327-1.9178
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004981
(v2.0)
Copb170349
287/1510.4113202/1510.3018102/1512.9376212/1511.80377/151-2.219955/151-2.0267
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004981
(v2.0)
Copb170349
52.1889952.72
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004981
(v2.0)
Copb170349
22.16346733.08
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005050
(v1.0)
Copb1NM_03337070349
87.913840.84518.2589215.620146.5601
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005050
(v1.0)
Copb1FR357300,NM_03337070349
173.39780.386717.722638.040374.0686
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005050
(v1.0)
Copb1NM_03337070349
91.9229.7856544.5629
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005050
(v1.0)
Copb1NM_03337070349
89.72540.43521.6506
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005050
(v1.0)
Copb1FR357300,NM_03337070349
119.03592.5585
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005050
(v1.0)
Copb1NM_03337070349
91.97549.6516323.7456
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005050
(v1.0)
Copb1NM_03337070349
7.6464815.081817.7834
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005050
(v1.0)
Copb1FR357300,NM_03337070349
59.817847.9267
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005050
(v1.0)
Copb1NM_03337070349
31.33724.64292
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005050
(v1.0)
Copb1NM_03337070349
30.879557.2059
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005050
(v1.0)
21566L0860D09-3Mm.27327Copb170349
U029148NAP010086-001Copb1;TC935525Q9JIF7U,F,24.06843.77633.0922.92913.38383.17673.4303
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005050
(v1.0)
1423301_atMm.277024Copb1NM_033370.370349
652.9751019.525156.6250239.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005050
(v1.0)
A_51_P160113Copb1NM_03337070349
11P1.20.319P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005050
(v1.0)
Copb170349
1527525478