DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005052
GeneCope
SynonymsCope1
Desc.coatomer protein complex, subunit epsilon
LocusNM_021538 chr8:72826684-72836889(+)
DB links


Entrez 59042
MGI 1891702
Ensembl ENSMUSG00000055681
Vega OTTMUSG00000027332
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004983
(v2.0)
CopeNM_02153859042
138.00314.10764.348218.143945.898445.660272.48266.6969741.737348.6442
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005052
(v1.0)
Cope59042
MGA0.93403
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004983
(v2.0)
Cope59042
694/533-0.1318423/533-0.4487421/5333.23171091/5332.359314/533-3.1045149/533-2.4263
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004983
(v2.0)
Cope59042
334/240-0.0359208/240-0.3212406/2404.29191028/2403.41644/240-3.55260/240-2.5694
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004983
(v2.0)
Cope59042
77.38915848.98
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004983
(v2.0)
Cope59042
20.22169621.06
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005052
(v1.0)
CopeNM_02153859042
14.67043.0112813.517631.801251.2377
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005052
(v1.0)
CopeFR242259,FR349672,NM_02153859042
115.21414.5432104.462236.442282.304
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005052
(v1.0)
CopeNM_02153859042
15.339250.4693.28537
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005052
(v1.0)
CopeNM_02153859042
14.97262.981044.98734
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005052
(v1.0)
CopeFR242259,FR349672,NM_02153859042
3.29404223.155
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005052
(v1.0)
CopeNM_02153859042
15.348149.77775.46995
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005052
(v1.0)
CopeNM_02153859042
12.515230.705328.8854
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005052
(v1.0)
CopeFR242259,FR349672,NM_02153859042
297.346276.164
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005052
(v1.0)
CopeNM_02153859042
6.708028.85151
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005052
(v1.0)
CopeNM_02153859042
7.311033.05686
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005052
(v1.0)
12955H3155F09-3Mm.28668Cope59042
U009425NAP010816-001Cope;TC880397,TC880395,TC880389,TC880387O890792.94753.06543.36933.65443.29843.60813.4903
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005052
(v1.0)
1416384_a_atMm.28668CopeNM_021538.159042
324.0750100.325285.275374.05
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005052
(v1.0)
A_51_P252410CopeNM_02153859042
11P1.4180.177P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005052
(v1.0)
Cope59042
87212182