DBTMEE:0005060
| Gene | Cops7a |
| Synonyms | COP9 complex S7a
D6Ertd35e |
| Description | COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana) |
| Locus | NM_001164089 UCSC: chr6:124908429-124915547(-) OLP: chr6:124908429-124915547(-)
NM_012003 UCSC: chr6:124908825-124915415(-) OLP: chr6:124908825-124915415(-)
|
| DB links |
Entrez 26894
MGI 1349400
Ensembl ENSMUSG00000030127
Vega OTTMUSG00000023393
|
| Feature | protein-coding |
| GO_BP |
-
 1 Terms
|
| GO_MF | |
| GO_CC |
-
3 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2004992 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0005060
(v1.0) | Cops7a | NM_001164089,NM_012003 | 26894
| 72.379 | 49.5195 | 64.9572 | 57.066 | 43.38 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0005060
(v1.0) | Cops7a | NM_001164089,NM_012003 | 26894
| 75.6789 | 15.7516 | 54.0268 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0005060
(v1.0) | Cops7a | NM_001164089,NM_012003 | 26894
| 73.8701 | 49.0222 | 64.4046 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0005060
(v1.0) | Cops7a | NM_001164089,NM_012003 | 26894
| 75.7229 | 15.5358 | 70.6368 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0005060
(v1.0) | Cops7a | NM_001164089,NM_012003 | 26894
| 60.1403 | 55.0995 | 40.4464 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0005060
(v1.0) | Cops7a | NM_001164089,NM_012003 | 26894
| 12.5725 | 82.3502 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0005060
(v1.0) | Cops7a | NM_001164089,NM_012003 | 26894
| 6.38209 | 5.11621 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0005060
(v1.0) | 17626 | L0002F05-3 | Mm.1444 | Cops7a | 26894
| U027858 | NAP093737-001 | Cops7a; | TC831547,TC831545 | O88546 | U,F,2 | 3.5253 | 3.5355 | 3.6851 | 4.2753 | 4.1156 | 4.2957 | 4.1516 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0005060
(v1.0) | 1423245_at | Mm.244536 | Cops7a | NM_012003.2,NM_001164089.1 | 26894
| 232.525 | 187.2 | 254.65 | 419.5 | 367.075 |
0005060
(v1.0) | 1429078_a_at | Mm.244536 | Cops7a | NM_012003.2,NM_001164089.1 | 26894
| 133.2 | 113.275 | 90.35 | 129.1 | 122.95 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0005060
(v1.0) | A_51_P108862 | Cops7a | NM_012003 | 26894
| 1 | 1 | P | 0.917 | 0.543 | P |
0005060
(v1.0) | A_52_P448040 | Cops7a | NM_012003 | 26894
| 1 | 1 | P | 0.436 | 0.106 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0005060
(v1.0) | Cops7a | 26894
| 6 | 7 | 4 | 10 | 9 | 7 |
|
