DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005061
GeneCops7b
SynonymsCOP9 complex S7b
D1Wsu66e
Desc.COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana)
LocusNM_172974 chr1:88483675-88503075(+)
DB links


Entrez 26895
MGI 1349388
Ensembl ENSMUSG00000026240
Vega OTTMUSG00000027307
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004993
(v2.0)
Cops7bNM_17297426895
4.9170715.533631.271127.362426.072910.198911.640135.210622.52159.78291
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005061
(v1.0)
Cops7b26895
Minor ZGA0.98786
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004993
(v2.0)
Cops7b26895
647/3980.1877444/3980.0415151/3982.169362/3981.189424/398-1.95141/398-2.0846
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004993
(v2.0)
Cops7b26895
250/1510.2132139/151-0.23468/1512.3597207/1511.769510/151-1.760467/151-1.7489
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004993
(v2.0)
Cops7b26895
34.582611829.31
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004993
(v2.0)
Cops7b26895
10.28875917.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005061
(v1.0)
Cops7bNM_17297426895
16.150921.733620.346518.0778.2771
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005061
(v1.0)
Cops7bNM_17297426895
20.792525.185223.740322.312610.3649
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005061
(v1.0)
Cops7bNM_17297426895
16.88721.7982223.7118
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005061
(v1.0)
Cops7bNM_17297426895
16.483621.515426.117
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005061
(v1.0)
Cops7bNM_17297426895
25.570932.0209
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005061
(v1.0)
Cops7bNM_17297426895
16.8971.7735928.6443
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005061
(v1.0)
Cops7bNM_17297426895
18.837717.45415.5317
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005061
(v1.0)
Cops7bNM_17297426895
22.071519.829
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005061
(v1.0)
Cops7bNM_17297426895
11.57174.93954
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005061
(v1.0)
Cops7bNM_17297426895
0.464511.14511
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005061
(v1.0)
5553H3002F12-3Mm.12973Cops7b26895
U000544NAP095040-001Cops7b;TC848560,TC848559O88547U,F3.2473.34373.75773.653.53373.54113.5205
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005061
(v1.0)
1418720_atMm.12973Cops7bNM_172974.226895
178.525148.875170.4199.625147.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005061
(v1.0)
A_52_P513034Cops7bNM_17297426895
11P0.8790.424P
Proteome N/A