DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005062
GeneCops8
SynonymsCsn8
Sgn8
Desc.COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
LocusNM_133805 chr1:92500000-92509916(+)
DB links


Entrez 108679
MGI 1915363
Ensembl ENSMUSG00000034432
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004994
(v2.0)
Cops8NM_133805108679
21.2803110.811134.98355.703755.392950.394726.8448176.1454.422961.8004
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005062
(v1.0)
Cops8108679
Maternal RNA0.97603
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004994
(v2.0)
Cops8108679
651/466-0.0304450/466-0.1662179/4662.1916349/4660.9105145/4660.3706875/4660.309
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004994
(v2.0)
Cops8108679
253/1610.1384180/1610.0445167/1613.5576310/1612.258816/161-1.2225173/161-0.492
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004994
(v2.0)
Cops8108679
65.830813748.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004994
(v2.0)
Cops8108679
21.27549123.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005062
(v1.0)
Cops8NM_133805108679
115.18193.540741.490738.461819.1304
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005062
(v1.0)
Cops8NM_133805108679
174.052120.13158.616854.785228.1116
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005062
(v1.0)
Cops8NM_133805108679
120.4337.78242102.055
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005062
(v1.0)
Cops8NM_133805108679
117.55492.6015130.296
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005062
(v1.0)
Cops8NM_133805108679
125.12175.722
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005062
(v1.0)
Cops8NM_133805108679
120.5037.67583142.905
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005062
(v1.0)
Cops8NM_133805108679
38.413937.136437.6587
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005062
(v1.0)
Cops8NM_133805108679
59.710162.3597
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005062
(v1.0)
Cops8NM_133805108679
53.528510.1383
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005062
(v1.0)
Cops8NM_133805108679
239.638129.146
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005062
(v1.0)
4990G0118C11-3Mm.295729430009J09Rik108679
U000593NAP093543-001AA408242;TC924393U,F,23.56773.59653.03233.15622.70063.00382.8328
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005062
(v1.0)
1415934_atMm.119177Cops8NM_133805.3108679
1589.3253022.225515.275416.55628.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005062
(v1.0)
A_51_P144926Cops8NM_133805108679
11P0.5790.116P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005062
(v1.0)
Cops8108679
794112719