DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005092
GeneCox4i1
SynonymsCox4
Cox4a
COXIV
Desc.cytochrome c oxidase subunit IV isoform 1
LocusNM_009941 chr8:123192190-123198109(+)
DB links


Entrez 12857
MGI 88473
Ensembl ENSMUSG00000031818
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
  •   1 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005025
(v2.0)
Cox4i1NM_001293559,NM_00994112857
909.12191.38821.9577253.703453.7311197.33210.7323.9693431.7981241.51
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005092
(v1.0)
Cox4i112857
Major ZGA0.83552
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005025
(v2.0)
Cox4i112857
933/5110.3551444/511-0.3183190/5112.1475451/5111.147221/511-2.4917164/511-2.2285
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005025
(v2.0)
Cox4i112857
466/1611.0159234/1610.421179/1613.6572404/1612.639813/161-1.502678/161-1.626
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005025
(v2.0)
Cox4i112857
102.315319751.94
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005025
(v2.0)
Cox4i112857
23.408211320.72
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005092
(v1.0)
Cox4i1NM_00994112857
195.77314.9879186.019309.957148.833
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005092
(v1.0)
Cox4i1NM_00994112857
234.99616.601209.097356.836172.451
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005092
(v1.0)
Cox4i1NM_00994112857
204.698349.81116.3521
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005092
(v1.0)
Cox4i1NM_00994112857
199.80614.837417.8279
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005092
(v1.0)
Cox4i1NM_00994112857
18.963825.6302
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005092
(v1.0)
Cox4i1NM_00994112857
204.817345.0219.553
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005092
(v1.0)
Cox4i1NM_00994112857
172.225299.275295.306
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005092
(v1.0)
Cox4i1NM_00994112857
352.765349.503
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005092
(v1.0)
Cox4i1NM_00994112857
17.7427113.019
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005092
(v1.0)
Cox4i1NM_00994112857
12.74117.82089
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005092
(v1.0)
14775J0814D06-3Cox4a12857
U009887NAP056652-1TC885764,TC885759,TC885754,TC885753P19783U,F3.01383.20363.4173.61523.2763.62973.7956
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005092
(v1.0)
1448322_a_atMm.386758Cox4i1NM_009941.212857
1364232.3687.22054.353078.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005092
(v1.0)
A_51_P165435Cox4i1NM_00994112857
11P0.6020.124P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005092
(v1.0)
Cox4i112857
786121119