DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005135
GeneCpne1
Synonyms
Desc.copine I
LocusNM_170590 chr2:155897577-155937701(-)
NM_170588 chr2:155897577-155937701(-)
DB links


Entrez 266692
MGI 2386621
Ensembl ENSMUSG00000074643
Vega OTTMUSG00000019746
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005068
(v2.0)
Cpne1NM_029397,NM_170588,NM_170590,NM_170598266692
16.258928.560930.464458.571157.498129.930421.640823.199844.59824.9664
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005135
(v1.0)
Cpne1Major ZGA0.99678
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005068
(v2.0)
Cpne1266692
463/2040.667323/2040.5445122/2042.7878395/2042.270511/204-2.058873/204-2.0594
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005068
(v2.0)
Cpne1266692
299/1230.7639179/1230.4221119/1233.4297369/1232.89097/123-1.932850/123-1.8666
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005135
(v1.0)
Cpne1NM_029397,NM_170588,NM_170590,NM_170598266692
29.704821.170643.624939.793415.1816
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005135
(v1.0)
Cpne1FR113403,FR299030,NM_029397,NM_170588,NM_170590,NM_170598266692
322.865174.854259.661262.705118.668
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005135
(v1.0)
Cpne1NM_029397,NM_170588,NM_170590,NM_170598266692
31.05915.9462123.0976
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005135
(v1.0)
Cpne1NM_029397,NM_170588,NM_170590,NM_170598266692
30.316820.95817.1983
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005135
(v1.0)
Cpne1FR113403,FR299030,NM_029397,NM_170588,NM_170590,NM_170598266692
161.42196.242
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005135
(v1.0)
Cpne1NM_029397,NM_170588,NM_170590,NM_170598266692
31.07725.8647718.8625
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005135
(v1.0)
Cpne1NM_029397,NM_170588,NM_170590,NM_170598266692
40.389938.422230.7915
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005135
(v1.0)
Cpne1FR113403,FR299030,NM_029397,NM_170588,NM_170590,NM_170598266692
233.916170.303
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005135
(v1.0)
Cpne1NM_029397,NM_170588,NM_170590,NM_170598266692
26.061136.265
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005135
(v1.0)
Cpne1NM_029397,NM_170588,NM_170590,NM_170598266692
3.262226.20833
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005135
(v1.0)
10360H3094G02-3Mm.27660Cpne1266692
U023550NAP094366-001Cpne1;TC830418,TC830417,TC830416Q925K4U,F,23.52573.13963.5013.83013.02853.16353.0671
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005135
(v1.0)
A_52_P403097Cpne1NM_170588266692
11P0.7250.193P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005135
(v1.0)
Cpne1266692
242363