DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005208
GeneCrk
SynonymsCrk-I
Crk-II
Crk-III
Crko
proto-oncogene c-crk
Desc.v-crk sarcoma virus CT10 oncogene homolog (avian)
LocusNM_133656 chr11:75492812-75519594(+)
DB links


Entrez 12928
MGI 88508
Ensembl ENSMUSG00000017776
Vega OTTMUSG00000006211
Featureprotein-coding
GO(BP)
  •   4 Terms
      regulation of Rho GTPase activity (GO:0032319)
      regulation of actin cytoskeleton organization (GO:0032956)
      regulation of Rac protein signal transduction (GO:0035020)
      ephrin receptor signaling pathway (GO:0048013)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005142
(v2.0)
CrkNM_001277219,NM_001277221,NM_13365612928
14.929942.648894.3344108.63632.669721.234141.311880.980338.883218.0043
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005208
(v1.0)
Crk12928
Major ZGA0.98798
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005142
(v2.0)
Crk12928
579/3820.087396/382-0.0641146/3822.1782350/3821.19978/382-3.365493/382-2.6181
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005142
(v2.0)
Crk12928
304/1730.2989184/173-0.0271143/1733.2386337/1732.27670/173-5.411255/173-2.2217
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005142
(v2.0)
Crk12928
38.55749540.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005142
(v2.0)
Crk12928
10.68726516.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005208
(v1.0)
CrkNM_13365612928
74.331109.126134.77837.647648.3448
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005208
(v1.0)
CrkNM_13365612928
89.7637119.363152.68643.485255.901
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005208
(v1.0)
CrkNM_13365612928
77.71999.07771119.059
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005208
(v1.0)
CrkNM_13365612928
75.8623108.03101.185
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005208
(v1.0)
CrkNM_13365612928
121.227114.788
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005208
(v1.0)
CrkNM_13365612928
77.7658.95338110.976
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005208
(v1.0)
CrkNM_13365612928
124.78436.350344.8433
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005208
(v1.0)
CrkNM_13365612928
67.529379.7991
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005208
(v1.0)
CrkNM_13365612928
129.88768.7484
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005208
(v1.0)
CrkNM_13365612928
35.098557.6511
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005208
(v1.0)
9542H3083A04-3Mm.22073Crk12928
U012958NAP000836-001Crk;Crko;TC903490Q64010U,F,23.66613.43223.21293.19613.19742.94163.0958
0005208
(v1.0)
12015H3131C03-3Mm.22073Crk12928
U012958NAP000836-001Crk;Crko;TC903490,TC794514Q64010U,F,23.353.41322.75282.94662.08772.29122.4609
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005208
(v1.0)
1416201_atMm.280125CrkNM_133656.412928
391.875641.25794.50275.225
0005208
(v1.0)
1425855_a_atMm.280125CrkNM_133656.412928
52.32584.15142.395.7575.35
0005208
(v1.0)
1436835_atMm.280125CrkNM_133656.412928
81.12568.97588.15107.42564.725
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005208
(v1.0)
A_51_P180452CrkNM_13365612928
11P0.9150.536P
0005208
(v1.0)
A_52_P515840CrkAK05279512928
11P0.8020.385P
0005208
(v1.0)
A_52_P618807CrkNM_13365612928
11P0.750.293P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005208
(v1.0)
Crk12928
41.20.672.21.4