DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005212
GeneCrlf3
SynonymsCreme9
cytor4
Desc.cytokine receptor-like factor 3
LocusNM_018776 chr11:79860001-79894457(-)
DB links


Entrez 54394
MGI 1860086
Ensembl ENSMUSG00000017561
Vega OTTMUSG00000000187
Featureprotein-coding
GO(BP)
  •   6 Terms
      negative regulation of cell growth (GO:0030308)
      negative regulation of S phase of mitotic cell cycle (GO:0045749)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of JAK-STAT cascade (GO:0046427)
      positive regulation of cell cycle arrest (GO:0071158)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005146
(v2.0)
Crlf3NM_001277106,NM_01877654394
5.4112226.698421.585187.68562.580928.004316.054518.96454.609224.9882
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005212
(v1.0)
Crlf354394
2-Cell Transient0.97013
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005146
(v2.0)
Crlf354394
572/3720.1076298/372-0.4348118/3721.9104433/3721.54430/372-1.5432179/372-1.6464
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005146
(v2.0)
Crlf354394
290/1390.5449128/139-0.233391/1392.8849323/1392.526314/139-1.196872/139-1.5287
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005146
(v2.0)
Crlf354394
54.908312743.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005146
(v2.0)
Crlf354394
16.86868719.39
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005212
(v1.0)
Crlf3NM_01877654394
28.282115.254666.14143.883211.39
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005212
(v1.0)
Crlf3NM_01877654394
30.827914.839666.818246.287911.8336
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005212
(v1.0)
Crlf3NM_01877654394
29.57162.0175516.6431
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005212
(v1.0)
Crlf3NM_01877654394
28.864815.101414.0741
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005212
(v1.0)
Crlf3NM_01877654394
15.068413.7005
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005212
(v1.0)
Crlf3NM_01877654394
29.58871.9899115.4359
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005212
(v1.0)
Crlf3NM_01877654394
61.236342.37138.2747
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005212
(v1.0)
Crlf3NM_01877654394
45.787940.4242
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005212
(v1.0)
Crlf3NM_01877654394
11.786223.1809
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005212
(v1.0)
Crlf3NM_01877654394
1.946472.51081
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005212
(v1.0)
1783C0253D06-3Crlf354394
U033158NAP096431-001Crlf3;TC794299Q91W213.58893.55623.60084.05283.55273.71043.7515
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005212
(v1.0)
1460338_a_atMm.272093Crlf3NM_018776.154394
154.55295.375302.9215.725150.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005212
(v1.0)
A_51_P384382Crlf3NM_01877654394
11P0.7150.188P
Proteome N/A