DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005228
GeneCry1
SynonymsPhll1
Desc.cryptochrome 1 (photolyase-like)
LocusNM_007771 chr10:84594445-84647799(-)
DB links


Entrez 12952
MGI 1270841
Ensembl ENSMUSG00000020038
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005163
(v2.0)
Cry1NM_00777112952
4.96316149.502208.039148.33847.32836.726222.29661179.68555.0657.06637
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005228
(v1.0)
Cry112952
Maternal RNA0.9715
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005163
(v2.0)
Cry112952
766/4280.3262536/4280.208190/4282.3967466/4281.4486114/4280.1478740/4280.1901
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005163
(v2.0)
Cry112952
436/2060.5666267/2060.2569184/2063.3634438/2062.405326/206-0.9027165/206-0.9133
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005163
(v2.0)
Cry112952
70.996716343.56
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005163
(v2.0)
Cry112952
21.4210919.65
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005228
(v1.0)
Cry1NM_00777112952
155.424144.221110.47232.86731.62781
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005228
(v1.0)
Cry1NM_00777112952
509.269452.08307.36896.07016.18276
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005228
(v1.0)
Cry1NM_00777112952
162.511.81508157.348
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005228
(v1.0)
Cry1NM_00777112952
158.626142.773133.269
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005228
(v1.0)
Cry1NM_00777112952
537.945326.582
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005228
(v1.0)
Cry1NM_00777112952
162.6041.79022146.165
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005228
(v1.0)
Cry1NM_00777112952
102.2831.734738.0832
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005228
(v1.0)
Cry1NM_00777112952
95.0318113.281
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005228
(v1.0)
Cry1NM_00777112952
53.885346.8824
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005228
(v1.0)
Cry1NM_00777112952
127.452122.096
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005228
(v1.0)
9425H3080H12-3Mm.26237Cry112952
U032082NAP105491-1Cry1;TC800367P97784U,F,23.82043.64723.17533.39223.14082.923.1088
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005228
(v1.0)
1433733_a_atMm.26237Cry1NM_007771.312952
304.05677.575468.25110.4250
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005228
(v1.0)
A_51_P302204Cry1NM_00777112952
11P0.6060.138P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005228
(v1.0)
Cry112952
010010