DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005276
GeneCsnk1a1
SynonymsCK1a
Desc.casein kinase 1, alpha 1
LocusNM_146087 chr18:61715236-61747953(+)
DB links


Entrez 93687
MGI 1934950
Ensembl ENSMUSG00000024576
Vega OTTMUSG00000035876
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005212
(v2.0)
Csnk1a1NM_14608793687
70.5172141.302295.065193.561129.75973.1039132.932231.481121.51166.9611
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005276
(v1.0)
Csnk1a193687
Minor ZGA0.98957
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005212
(v2.0)
Csnk1a193687
652/3360.4425430/3360.239192/3362.75620/3362.2067120/3360.5666603/3360.2437
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005212
(v2.0)
Csnk1a193687
351/1550.663204/1550.2785181/1553.724579/1553.211830/155-0.3024109/155-1.0967
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005212
(v2.0)
Csnk1a193687
54.072419028.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005212
(v2.0)
Csnk1a193687
10.6971377.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005276
(v1.0)
Csnk1a1NM_14608793687
146.849203.404144.12889.939693.372
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005276
(v1.0)
Csnk1a1FR098235,FR343401,NM_14608793687
239.718403.122258.491161.983137.639
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005276
(v1.0)
Csnk1a1NM_14608793687
153.54425.7889221.918
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005276
(v1.0)
Csnk1a1NM_14608793687
149.874201.361171.284
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005276
(v1.0)
Csnk1a1FR098235,FR343401,NM_14608793687
1403.393922.99
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005276
(v1.0)
Csnk1a1NM_14608793687
153.63425.4357187.858
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005276
(v1.0)
Csnk1a1NM_14608793687
133.4486.840384.0184
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005276
(v1.0)
Csnk1a1FR098235,FR343401,NM_14608793687
434.995426.469
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005276
(v1.0)
Csnk1a1NM_14608793687
35.718757.862
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005276
(v1.0)
Csnk1a1NM_14608793687
40.420652.0652
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005276
(v1.0)
9574H3083D12-3Mm.1805965430427P18Rik66792
U043677NAP010867-001Csnk1a1;TC874306Q64506U,F,23.57113.58553.50293.41563.85063.65293.8155
0005276
(v1.0)
11225H3110B12-3Mm.43737Csnk1a193687
U043677NAP056960-1Csnk1a1;TC874298,TC874296Q64506U,F,22.19722.41342.55912.72262.4262.50912.6207
0005276
(v1.0)
17211K0542F08-3Mm.212281U043677NAP031920-1Csnk1a1;TC943242Q64506U,F,22.08512.1812.28112.05142.20962.4342.4473
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005276
(v1.0)
1424827_a_atMm.26908Csnk1a1NM_146087.293687
1691.1751839.5533981271.6251427.875
0005276
(v1.0)
1428537_atMm.26908Csnk1a1NM_146087.293687
874.3251231.4751725.35663.75685.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005276
(v1.0)
A_51_P336491Csnk1a1NM_14608793687
11P0.6070.126P
0005276
(v1.0)
A_51_P451837Csnk1a1AK01735393687
11P1.6450.126P
0005276
(v1.0)
A_51_P453856Csnk1a1NM_14608793687
11P0.7880.252P
0005276
(v1.0)
A_52_P339722Csnk1a1NM_14608793687
11P0.4620.1P
0005276
(v1.0)
A_52_P477752Csnk1a1AK07626493687
11P0.9930.953P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005276
(v1.0)
Csnk1a193687
430430