DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0005283

Gene

Csnk2a2

Synonyms

CK2

Description

casein kinase 2, alpha prime polypeptide

Locus

NM_009974 UCSC: chr8:97969996-98012720(-) OLP: chr8:97969996-98012720(-)

DB links

Entrez 13000
MGI 88547
Ensembl ENSMUSG00000046707

Feature

protein-coding

GO_BP

9 Terms

GO_MF

9 Terms

GO_CC

2 Terms

KEGG

5 Terms

see DBTMEE:2005219 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0005283 (v1.0)	Csnk2a2	NM_009974	13000	30.9112	28.3183	21.4428	18.5467	2.25655

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0005283 (v1.0)	Csnk2a2	NM_009974	13000	32.3205	3.14248	30.8959

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0005283 (v1.0)	Csnk2a2	NM_009974	13000	31.548	28.034	21.6529

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0005283 (v1.0)	Csnk2a2	NM_009974	13000	32.3393	3.09944	23.7482

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0005283 (v1.0)	Csnk2a2	NM_009974	13000	19.8527	17.9076	13.657

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0005283 (v1.0)	Csnk2a2	NM_009974	13000	12.787	7.76636

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0005283 (v1.0)	Csnk2a2	NM_009974	13000	20.2433	33.6392

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0005283 (v1.0)	9138	H3076H10-3	Mm.51136	Csnk2a2	13000	U030136	NAP001240-001		TC925779,TC925777	O54833	U,F,2	3.2967	2.946	2.8809	2.9956	3.0352	2.9472	2.9124
0005283 (v1.0)	10267	H3093E03-3	Mm.51136	Csnk2a2	13000	U030136	NAP001240-001	Csnk2a2;	TC899052	O54833	U,F,2	3.1154	3.0026	3.1593	2.9953	3.1682	3.0754	3.0899
0005283 (v1.0)	10769	H3103C11-3	Mm.221290	1110035J23Rik	68689	U030136	NAP001240-001	Csnk2a2;	TC899052	O54833	U,F,2	3.4893	3.5245	3.1331	3.3679	3.0264	3.3858	3.2962

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0005283 (v1.0)	1453099_at	Mm.440348	Csnk2a2	NM_009974.3	13000	659.825	871.6	620.375	573.175	459.775
0005283 (v1.0)	1460646_at	Mm.440348	Csnk2a2	NM_009974.3	13000	0	555.45	0	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0005283 (v1.0)	A_51_P202964	Csnk2a2	NM_009974	13000	1	1	P	1.239	0.277	P
0005283 (v1.0)	A_52_P207614	Csnk2a2	AK004115	13000	1	1	P	1.55	0.142	P
0005283 (v1.0)	A_52_P405362	Csnk2a2	AK019507	13000	1	1	P	0.81	0.398	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0005283 (v1.0)	Csnk2a2	13000	3	3	0.5	3	3	0.5