DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005309
GeneCstf1
Synonyms
Desc.cleavage stimulation factor, 3' pre-RNA, subunit 1
LocusNM_024199 chr2:172196503-172206586(+)
DB links


Entrez 67337
MGI 1914587
Ensembl ENSMUSG00000027498
Vega OTTMUSG00000016157
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005245
(v2.0)
Cstf1NM_02419967337
17.944651.82724.2264101.45873.141232.043121.816845.679665.32133.9416
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005309
(v1.0)
Cstf167337
Major ZGA0.892
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005245
(v2.0)
Cstf167337
711/542-0.121446/542-0.3966212/5422.2217576/5421.414927/542-2.228198/542-2.0438
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005245
(v2.0)
Cstf167337
345/2380.0227220/238-0.2286202/2383.2998547/2382.519315/238-1.8621110/238-1.6991
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005245
(v2.0)
Cstf167337
114.800621453.65
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005245
(v2.0)
Cstf167337
23.700411820.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005309
(v1.0)
Cstf1NM_02419967337
53.886516.762575.519350.729315.5431
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005309
(v1.0)
Cstf1NM_02419967337
71.165421.7437101.03475.289919.6357
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005309
(v1.0)
Cstf1NM_02419967337
56.34336.5625418.2883
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005309
(v1.0)
Cstf1NM_02419967337
54.996616.594233.8721
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005309
(v1.0)
Cstf1NM_02419967337
31.624551.3118
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005309
(v1.0)
Cstf1NM_02419967337
56.3766.4726637.1498
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005309
(v1.0)
Cstf1NM_02419967337
69.919148.981145.1726
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005309
(v1.0)
Cstf1NM_02419967337
84.208272.9646
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005309
(v1.0)
Cstf1NM_02419967337
12.05122.166
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005309
(v1.0)
Cstf1NM_02419967337
5.436961.9704
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005309
(v1.0)
18730L0225A04-3Mm.269441700057K18Rik67337
U002899NAP095604-0011700057K18Rik;TC826132Q99LC2U,F,23.47343.48563.7673.99683.62333.78613.6507
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005309
(v1.0)
1448597_atMm.26944Cstf1NM_024199.267337
165.050711.825390.7228.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005309
(v1.0)
A_51_P277767Cstf1NM_02419967337
11P0.9750.84P
0005309
(v1.0)
A_52_P296109Cstf1AK07866767337
11P1.1440.406P
Proteome N/A