DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005312
GeneCstf3
Synonyms
Desc.cleavage stimulation factor, 3' pre-RNA, subunit 3
LocusNM_145529 chr2:104430641-104505582(+)
NM_177253 chr2:104430641-104451563(+)
NM_001037326 chr2:104430641-104449586(+)
DB links


Entrez 228410
MGI 1351825
Ensembl ENSMUSG00000027176
Vega OTTMUSG00000014953
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005248
(v2.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
8.7300115.30415.210119.924115.666919.536316.994613.639713.891622.3045
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005312
(v1.0)
Cstf3228410
2-Cell Transient0.99758
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005248
(v2.0)
Cstf3228410
610/3430.317470/3430.3374201/3432.7871604/3432.139532/343-1.3373191/343-1.4368
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005248
(v2.0)
Cstf3228410
295/1630.3412223/1630.3341192/1633.7412550/1633.066413/163-1.5258/163-2.0617
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005248
(v2.0)
Cstf3228410
33.013410531.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005248
(v2.0)
Cstf3228410
9.95878012.45
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
15.846310.44714.844710.817911.887
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
149.9990.2073202.26985.5359104.845
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
16.56883.192611.3979
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
16.172810.342110.1058
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
167.589218.514
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
16.57843.1488811.0837
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
13.743810.44519.59105
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
171.63269.9005
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
19.94588.60126
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005312
(v1.0)
Cstf3NM_001037326,NM_145529,NM_177253228410
1.088170.856339
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005312
(v1.0)
4003C0910G10-3Mm.39286LOC228410228410
U002194NAP020383-001TC810694Q99LI7U,F,22.56512.57212.68752.55532.75782.61762.7938
0005312
(v1.0)
7195H3044B08-3LOC228410228410
U002194NAP007187-001TC926737Q99LI7U,F,22.69722.94782.44222.78132.58492.73912.636
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005312
(v1.0)
1424723_s_atMm.259876Cstf3NM_145529.3,NM_177253.4,NM_001037326.2228410
425.375690.95183352.35360.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005312
(v1.0)
A_51_P382928Cstf3NM_145529228410
11P0.960.76P
Proteome N/A