DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005323
GeneCtdp1
Synonyms
Desc.CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
LocusNM_026295 chr18:80604698-80666406(-)
DB links


Entrez 67655
MGI 1926953
Ensembl ENSMUSG00000033323
Vega OTTMUSG00000031152
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005260
(v2.0)
Ctdp1NM_02629567655
7.074258.8373113.223336.456518.35525.7460610.599414.50118.97416.31931
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005323
(v1.0)
Ctdp167655
2-Cell Transient0.99581
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005260
(v2.0)
Ctdp167655
880/5630.1313497/563-0.2955636/5633.74851613/5632.844373/563-0.8804561/563-0.6032
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005260
(v2.0)
Ctdp167655
450/2310.4476244/231-0.037548/2314.77611244/2313.745814/231-1.9128111/231-1.6434
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005260
(v2.0)
Ctdp167655
65.633416440.02
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005260
(v2.0)
Ctdp167655
13.20469913.34
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005323
(v1.0)
Ctdp1NM_02629567655
9.185889.2335827.161212.73427.48727
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005323
(v1.0)
Ctdp1FR333417,NM_02629567655
46.676547.3877193.52976.901132.418
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005323
(v1.0)
Ctdp1NM_02629567655
9.604682.5871210.074
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005323
(v1.0)
Ctdp1NM_02629567655
9.375119.1408610.7462
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005323
(v1.0)
Ctdp1FR333417,NM_02629567655
63.43870.7253
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005323
(v1.0)
Ctdp1NM_02629567655
9.610262.5516911.7861
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005323
(v1.0)
Ctdp1NM_02629567655
25.147112.295413.0616
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005323
(v1.0)
Ctdp1FR333417,NM_02629567655
78.8302174.046
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005323
(v1.0)
Ctdp1NM_02629567655
14.536510.2401
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005323
(v1.0)
Ctdp1NM_02629567655
7.576132.29581
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005323
(v1.0)
12156H3136E06-34930563P03Rik67655
U038607NAP006718-0014930563P03Rik;TC831774Q9D4S8U,F,22.73442.72772.72123.00972.3522.572.3759
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005323
(v1.0)
1452697_atMm.312893Ctdp1NM_026295.267655
148.425218.525275.9250144.175
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005323
(v1.0)
A_51_P313467Ctdp1NM_02629567655
11P0.4770.0884P
Proteome N/A