DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005388
GeneCul1
Synonyms
Desc.cullin 1
LocusNM_012042 chr6:47404323-47476138(+)
DB links


Entrez 26965
MGI 1349658
Ensembl ENSMUSG00000029686
Vega OTTMUSG00000022333
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
  •   2 Terms
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005326
(v2.0)
Cul1NM_01204226965
25.1169348.109639.697300.569184.15222.528254.1537491.832171.91623.7265
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005388
(v1.0)
Cul126965
Minor ZGA0.92079
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005326
(v2.0)
Cul126965
974/3630.9093772/3630.9705799/3634.69373590/3634.627740/363-1.1049301/363-0.8663
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005326
(v2.0)
Cul126965
582/1611.3357370/1611.0796631/1615.46912114/1615.024412/161-1.6095125/161-0.956
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005326
(v2.0)
Cul126965
27.590510426.53
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005326
(v2.0)
Cul126965
7.7664839.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005388
(v1.0)
Cul1NM_01204226965
361.75441.661223.848127.69638.3472
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005388
(v1.0)
Cul1NM_01204226965
7225.627837.553544.363221.33772.486
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005388
(v1.0)
Cul1NM_01204226965
378.2439.18549481.862
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005388
(v1.0)
Cul1NM_01204226965
369.202437.227363.721
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005388
(v1.0)
Cul1NM_01204226965
57304586.96
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005388
(v1.0)
Cul1NM_01204226965
378.4639.05968398.916
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005388
(v1.0)
Cul1NM_01204226965
207.248123.295118.837
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005388
(v1.0)
Cul1NM_01204226965
549.519588.336
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005388
(v1.0)
Cul1NM_01204226965
178.8138.5
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005388
(v1.0)
Cul1NM_01204226965
364.536445.332
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005388
(v1.0)
1816C0259B04-3Mm.21771Cul126965
U006809NAP033284-1Cul1;TC943933Q9WTX6U,F,21.76332.23242.21221.83361.97912.12842.2453
0005388
(v1.0)
9862H3087D05-3Cul126965
U006809NAP106993-1Cul1;TC836061,TC836055Q9WTX6U,F,24.2964.23493.45363.44242.42882.89092.8463
0005388
(v1.0)
14528J0550H01-3Mm.26273U006809NAP049010-1Cul1;TC807740Q9WTX6U,F,23.17812.98632.90452.93993.60353.26323.462
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005388
(v1.0)
1448174_atMm.87611Cul1NM_012042.326965
2871.4754937.93188.925675.025494.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005388
(v1.0)
A_51_P335509Cul1NM_01204226965
11P0.6420.142P
0005388
(v1.0)
A_52_P149250Cul1NM_01204226965
11P0.4840.0909P
0005388
(v1.0)
A_52_P664699Cul1NM_01204226965
11P0.7630.225P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005388
(v1.0)
Cul126965
3151298623771