DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005390
GeneCul3
Synonyms
Desc.cullin 3
LocusNM_016716 chr1:80263393-80337005(-)
DB links


Entrez 26554
MGI 1347360
Ensembl ENSMUSG00000004364
Vega OTTMUSG00000035349
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ubiquitin mediated proteolysis (mmu04120)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005328
(v2.0)
Cul3NM_01671626554
96.763231.489111.3149198.729132.4720.027723.52716.01115114.60419.7446
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005390
(v1.0)
Cul326554
2-Cell Transient0.9782
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005328
(v2.0)
Cul326554
583/3550.2023448/3550.2189156/3552.3755401/3551.500548/355-0.816237/355-1.1771
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005328
(v2.0)
Cul326554
294/1480.4747179/1480.1572151/1483.5259367/1482.62117/148-2.191761/148-1.8524
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005328
(v2.0)
Cul326554
26.34587535.13
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005328
(v2.0)
Cul326554
6.67225412.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005390
(v1.0)
Cul3NM_01671626554
32.72237.80422147.88591.808916.4327
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005390
(v1.0)
Cul3NM_01671626554
535.366157.6862549.781624.42427.881
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005390
(v1.0)
Cul3NM_01671626554
34.214135.38738.51457
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005390
(v1.0)
Cul3NM_01671626554
33.39647.725864.44256
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005390
(v1.0)
Cul3NM_01671626554
213.798178.5
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005390
(v1.0)
Cul3NM_01671626554
34.23434.90264.87245
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005390
(v1.0)
Cul3NM_01671626554
136.91888.645179.149
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005390
(v1.0)
Cul3NM_01671626554
193.175168.756
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005390
(v1.0)
Cul3NM_01671626554
40.4128198.92
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005390
(v1.0)
Cul3NM_01671626554
8.6651111.4937
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005390
(v1.0)
2807C0404C03-3Mm.12665Cul326554
U043832NAP032554-1Cul3;TC814379Q9CTE0U,F,22.27652.41682.68772.16533.0662.69153.0057
0005390
(v1.0)
10823H3104A12-3Mm.12665Cul326554
2.39392.42742.4722.34742.07462.0472.1183
0005390
(v1.0)
11355H3113H08-3Cul326554
U043832NAP007312-001Cul3;TC814380,TC814379Q9CTE0U,F,23.34053.12743.61023.86243.33853.43423.4128
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005390
(v1.0)
1422794_atMm.12665Cul3NM_016716.426554
240.625161.7251657.15322.425364.1
0005390
(v1.0)
1434717_atMm.12665Cul3NM_016716.426554
0000722.5
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005390
(v1.0)
A_51_P188655Cul3AF12973826554
11P0.5020.093P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005390
(v1.0)
Cul326554
250260