DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005392
GeneCul4b
Synonyms
Desc.cullin 4B
LocusNM_028288 chrX:35884798-35929373(-)
NM_001110142 chrX:35884798-35929373(-)
DB links


Entrez 72584
MGI 1919834
Ensembl ENSMUSG00000031095
Vega OTTMUSG00000017236
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
  •   2 Terms
      Nucleotide excision repair (mmu03420)
      Ubiquitin mediated proteolysis (mmu04120)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005330
(v2.0)
Cul4bNM_001110142,NM_02828872584
6.49056103.108204.11283.513835.255540.149532.7199113.40447.934342.1079
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005392
(v1.0)
Cul4b72584
Minor ZGA0.95165
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005330
(v2.0)
Cul4b72584
286/1690.2448221/1690.2694146/1693.2998654/1693.264432/169-0.3338202/169-0.3398
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005330
(v2.0)
Cul4b72584
140/660.56592/660.3582139/664.4425598/664.459311/66-0.489975/66-0.4078
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005330
(v2.0)
Cul4b72584
30.27215555.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005330
(v2.0)
Cul4b72584
9.13613327.69
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005392
(v1.0)
Cul4bNM_001110142,NM_02828872584
107.132140.68662.148124.409322.9854
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005392
(v1.0)
Cul4bNM_001110142,NM_021550,NM_02828872584
499.125593.007288.308125.959102.889
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005392
(v1.0)
Cul4bNM_001110142,NM_02828872584
112.0162.37367153.491
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005392
(v1.0)
Cul4bNM_001110142,NM_02828872584
109.339139.27383.8826
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005392
(v1.0)
Cul4bNM_001110142,NM_021550,NM_02828872584
1607.23706.591
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005392
(v1.0)
Cul4bNM_001110142,NM_02828872584
112.0812.3411691.9996
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005392
(v1.0)
Cul4bNM_001110142,NM_02828872584
57.539423.568233.238
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005392
(v1.0)
Cul4bNM_001110142,NM_021550,NM_02828872584
199.131263.873
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005392
(v1.0)
Cul4bNM_001110142,NM_02828872584
50.861268.1995
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005392
(v1.0)
Cul4bNM_001110142,NM_02828872584
18.758258.7372
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005392
(v1.0)
4774G0104F08-3Mm.26885Cul4b72584
U039328NAP031678-1Cul4b;TC909147Q9CZM5U,F,24.28554.36723.30953.10273.1443.33263.6304
0005392
(v1.0)
8994H3075B06-3Mm.26885Cul4b72584
U039328NAP098810-001Cul4b;TC909150,TC909148,TC909147Q9CZM5U,F,23.46173.41723.38183.59093.08113.34823.3955
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005392
(v1.0)
1417453_atMm.327675Cul4bNM_001110142.1,NM_028288.572584
607.25452.05809.02588.575304.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005392
(v1.0)
A_51_P120948Cul4bNM_02828872584
11P0.6880.166P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005392
(v1.0)
Cul4b72584
1919103538.514