DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005628
GeneD230025D16Rik
SynonymsLin10
Desc.RIKEN cDNA D230025D16 gene
LocusNM_145604 chr8:107749088-107776951(+)
DB links


Entrez 234678
MGI 2443049
Ensembl ENSMUSG00000031889
Vega OTTMUSG00000031385
Featureprotein-coding
GO(BP)
  •   1 Terms
      Golgi to plasma membrane protein transport (GO:0043001)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005559
(v2.0)
D230025D16RikNM_145604234678
4.5974537.594822.3667133.392160.33329.24978.4886227.9188130.65121.8862
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005628
(v1.0)
D230025D16Rik234678
Major ZGA0.99536
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005559
(v2.0)
D230025D16Rik234678
630/461-0.0621432/461-0.2094100/4611.3732290/4610.659758/461-0.9212408/461-0.7733
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005559
(v2.0)
D230025D16Rik234678
324/1930.2335193/193-0.115695/1932.5056273/1931.818216/193-1.478118/193-1.2982
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005559
(v2.0)
D230025D16Rik234678
54.953913640.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005559
(v2.0)
D230025D16Rik234678
10.06378611.7
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005628
(v1.0)
D230025D16RikNM_145604234678
39.081615.442499.27111.1026.03454
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005628
(v1.0)
D230025D16RikFR405168,NM_145604234678
49.543430.7669161.617213.90915.5066
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005628
(v1.0)
D230025D16RikNM_145604234678
40.86341.6813316.848
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005628
(v1.0)
D230025D16RikNM_145604234678
39.886715.287420.7136
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005628
(v1.0)
D230025D16RikFR405168,NM_145604234678
330.954317.776
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005628
(v1.0)
D230025D16RikNM_145604234678
40.88721.658322.718
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005628
(v1.0)
D230025D16RikNM_145604234678
91.9085107.27490.2759
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005628
(v1.0)
D230025D16RikFR405168,NM_145604234678
187.671163.417
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005628
(v1.0)
D230025D16RikNM_145604234678
23.714953.1994
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005628
(v1.0)
D230025D16RikNM_145604234678
12.75125.50633
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005628
(v1.0)
6763H3034C05-3Mm.27186BC006874234678
U009739NAP121118-001BC006874;TC899237,TC899235,TC899232Q922R1U,F,22.85582.65592.99883.42112.97913.01972.9165
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005628
(v1.0)
1426521_atMm.27186D230025D16RikNM_145604.2234678
84.248.35124.375145.77573.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005628
(v1.0)
A_51_P126525Lin10NM_145604234678
11P0.5520.108P
Proteome N/A