DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005646
GeneD430042O09Rik
Synonyms
Desc.RIKEN cDNA D430042O09 gene
LocusNM_001081022 chr7:132851390-133018311(+)
DB links


Entrez 233865
MGI 2442760
Ensembl ENSMUSG00000032743
Vega OTTMUSG00000030952
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005575
(v2.0)
D430042O09RikNM_001081022233865
4.2137910.364910.896411.5525.747251.49034.3686212.65555.576720.975698
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005646
(v1.0)
D430042O09Rik233865
Major ZGA0.9533
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005575
(v2.0)
D430042O09Rik233865
744/4990.0633476/499-0.1839232/4992.4677497/4991.321133/499-1.8296200/499-1.9104
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005575
(v2.0)
D430042O09Rik233865
349/1940.3328202/194-0.0576209/1943.6279446/1942.516910/194-2.113380/194-1.8577
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005575
(v2.0)
D430042O09Rik233865
64.577313946.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005575
(v2.0)
D430042O09Rik233865
23.87819225.95
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005646
(v1.0)
D430042O09RikNM_001081022233865
10.77477.559738.592373.976813.03632
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005646
(v1.0)
D430042O09RikNM_001081022233865
116.626100.357305.35647.79240.044
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005646
(v1.0)
D430042O09RikNM_001081022233865
11.2661.541038.24783
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005646
(v1.0)
D430042O09RikNM_001081022233865
10.99677.483829.37382
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005646
(v1.0)
D430042O09RikNM_001081022233865
75.787458.2931
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005646
(v1.0)
D430042O09RikNM_001081022233865
11.27251.5199210.2809
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005646
(v1.0)
D430042O09RikNM_001081022233865
7.95523.839773.87951
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005646
(v1.0)
D430042O09RikNM_001081022233865
27.943233.3419
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005646
(v1.0)
D430042O09RikNM_001081022233865
4.538872.27576
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005646
(v1.0)
D430042O09RikNM_001081022233865
2.709932.71531
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005646
(v1.0)
16227K0344E06-3Mm.27029MGC31549233865
U008763NAP012090-001MGC31549;TC832419U,F,23.61893.82354.21143.96883.58483.99663.6566
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005646
(v1.0)
1435366_atMm.274389D430042O09RikNM_001081022.1233865
275.2246.275000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005646
(v1.0)
A_51_P446022D430042O09RikAK052528233865
11P0.9650.864P
0005646
(v1.0)
A_52_P108021D430042O09RikBC030902233865
11P0.9090.514P
0005646
(v1.0)
A_52_P108023D430042O09RikBC030902233865
11P1.0150.907P
Proteome N/A