DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005752
GeneDcaf12
SynonymsWdr40a
Desc.DDB1 and CUL4 associated factor 12
LocusNM_026893 chr4:41238333-41261934(-)
DB links


Entrez 68970
MGI 1916220
Ensembl ENSMUSG00000028436
Vega OTTMUSG00000006637
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005677
(v2.0)
Dcaf12NM_02689368970
17.331694.0666158.67850.728638.584117.462112.1772152.89334.315616.0763
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005752
(v1.0)
Dcaf1268970
Minor ZGA0.99964
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005677
(v2.0)
Dcaf1268970
729/4870.069521/487-0.0188430/4873.38931250/4872.684952/487-1.1544407/487-0.8558
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005677
(v2.0)
Dcaf1268970
375/2340.1669234/234-0.1157393/2344.2798998/2343.409816/234-1.7506120/234-1.5509
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005677
(v2.0)
Dcaf1268970
61.022916237.67
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005677
(v2.0)
Dcaf1268970
22.630211819.18
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005752
(v1.0)
Dcaf12NM_02689368970
97.7876109.85137.757326.7588.53691
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005752
(v1.0)
Dcaf12NM_02689368970
187.318172.91764.883250.218912.8303
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005752
(v1.0)
Dcaf12NM_02689368970
102.2466.33836119.85
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005752
(v1.0)
Dcaf12NM_02689368970
99.8021108.748113.218
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005752
(v1.0)
Dcaf12NM_02689368970
170.947311.41
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005752
(v1.0)
Dcaf12NM_02689368970
102.3056.25155124.174
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005752
(v1.0)
Dcaf12NM_02689368970
34.957425.835923.7475
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005752
(v1.0)
Dcaf12NM_02689368970
71.617664.4188
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005752
(v1.0)
Dcaf12NM_02689368970
56.340622.067
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005752
(v1.0)
Dcaf12NM_02689368970
44.403564.8121
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005752
(v1.0)
2116C0292E05-3Mm.288911500001L20Rik68970
U024969NAP001511-001TC904043Q9DB95U,F,23.22133.27273.53833.40833.19673.30153.2309
0005752
(v1.0)
3418C0657E09-3Mm.288911500001L20Rik68970
U024969NAP001511-001TC904043Q9DB95U,F,23.6353.613.16673.22132.72142.90863.0009
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005752
(v1.0)
1438669_atMm.28891Dcaf12NM_026893.368970
419.325722.35234.2750124.825
0005752
(v1.0)
1429392_atMm.28891Dcaf12NM_026893.368970
525.825703.175934.4385.675401.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005752
(v1.0)
A_51_P179023Wdr40aNM_02689368970
11P0.7290.199P
0005752
(v1.0)
A_52_P78123Wdr40aNM_02689368970
11P1.0980.537P
Proteome N/A