DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005797
GeneDcun1d1
SynonymspTes3
Rp42
SCCRO
Tes3
Desc.DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
LocusNM_033623 chr3:35791027-35828996(-)
NM_001205361 chr3:35791027-35831888(-)
NM_001205362 chr3:35791027-35831256(-)
DB links


Entrez 114893
MGI 2150386
Ensembl ENSMUSG00000027708
Vega OTTMUSG00000028173
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005722
(v2.0)
Dcun1d1NM_001205361,NM_001205362,NM_033623114893
138.98790.8586168.96673.679224.226810.298910.0647102.07919.15139.39298
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005797
(v1.0)
Dcun1d1114893
Minor ZGA0.94255
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005722
(v2.0)
Dcun1d1114893
741/3840.4346574/3840.46271467/3845.49094351/3844.824425/384-1.8423162/384-1.8348
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005722
(v2.0)
Dcun1d1114893
344/1600.5885248/1600.5134812/1605.84082084/1605.01277/160-2.301271/160-1.7501
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005722
(v2.0)
Dcun1d1114893
43.019110640.58
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005722
(v2.0)
Dcun1d1114893
10.34643926.53
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005797
(v1.0)
Dcun1d1NM_033623114893
111.864140.73263.591820.36838.62041
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005797
(v1.0)
Dcun1d1FR219165,NM_033623114893
75.4817109.05563.26598.451922.9286
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005797
(v1.0)
Dcun1d1NM_033623114893
116.96462.5855153.542
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005797
(v1.0)
Dcun1d1NM_033623114893
114.169139.31991.7711
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005797
(v1.0)
Dcun1d1FR219165,NM_033623114893
31.525422.4517
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005797
(v1.0)
Dcun1d1NM_033623114893
117.03261.7283100.651
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005797
(v1.0)
Dcun1d1NM_033623114893
58.876119.666415.8516
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005797
(v1.0)
Dcun1d1FR219165,NM_033623114893
4.408744.18565
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005797
(v1.0)
Dcun1d1NM_033623114893
133.44176.7113
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005797
(v1.0)
Dcun1d1NM_033623114893
15.473739.4997
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005797
(v1.0)
20089L0520B03-3Mm.30127Tes3114893
U043840NAP031863-1Tes3;TC799206Q99NE7U,F,23.45083.3562.99662.91952.94833.00312.9547
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005797
(v1.0)
1452079_s_atMm.474495Dcun1d1114893
483.1531.825212.925030.525
0005797
(v1.0)
1425986_a_atMm.474495Dcun1d1114893
75.1139.675126.700
0005797
(v1.0)
1452080_a_atMm.474495Dcun1d1114893
446.05445.725500.2070.975
0005797
(v1.0)
1455053_a_atMm.474495Dcun1d1114893
105.325168.7164.47500
0005797
(v1.0)
1445260_atMm.474495Dcun1d1114893
132.1250139.425230.65191.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005797
(v1.0)
A_51_P187726Tes3NM_033623114893
11P1.4050.183P
0005797
(v1.0)
A_52_P414420Tes3NM_033623114893
11P1.2910.237P
0005797
(v1.0)
A_52_P430934Tes3NM_033623114893
11P0.6040.208P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005797
(v1.0)
Dcun1d1114893
22222.52