DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005804
GeneDda1
Synonyms
Desc.DET1 and DDB1 associated 1
LocusNM_025600 chr8:73993093-74000334(+)
DB links


Entrez 66498
MGI 1913748
Ensembl ENSMUSG00000074247
Vega OTTMUSG00000032855
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005729
(v2.0)
Dda1NM_02560066498
34.603244.109849.036742.50427.067414.8523.387191.572824.011315.3826
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005804
(v1.0)
Dda166498
Maternal RNA0.98843
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005729
(v2.0)
Dda166498
850/5610.0865480/561-0.3405862/5614.19162333/5613.381617/561-2.9148159/561-2.4072
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005729
(v2.0)
Dda166498
375/2060.3499220/206-0.0212603/2065.07041532/2064.209411/206-2.072673/206-2.0734
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005729
(v2.0)
Dda166498
59.994616137.26
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005729
(v2.0)
Dda166498
19.41315833.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005804
(v1.0)
Dda1NM_02560066498
45.874633.864331.63118.754516.7135
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005804
(v1.0)
Dda1FR012146,NM_02560066498
244.508212.017139.408108.63844.7136
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005804
(v1.0)
Dda1NM_02560066498
47.966112.654736.9467
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005804
(v1.0)
Dda1NM_02560066498
46.819733.524368.0199
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005804
(v1.0)
Dda1FR012146,NM_02560066498
2219.472544.69
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005804
(v1.0)
Dda1NM_02560066498
47.99412.481474.6019
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005804
(v1.0)
Dda1NM_02560066498
29.285418.108216.6943
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005804
(v1.0)
Dda1FR012146,NM_02560066498
216.066153.003
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005804
(v1.0)
Dda1NM_02560066498
18.97612.8112
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005804
(v1.0)
Dda1NM_02560066498
115.12768.2646
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005804
(v1.0)
9606H3083H11-3Mm.299011500034J01Rik66498
U009462NAP005159-001TC909176,TC909175Q9D9Z5U,F,24.17124.05893.57663.8763.4063.55023.6074
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005804
(v1.0)
1429038_atMm.260360Dda1NM_025600.166498
173.525280.65304.075159.575152.125
0005804
(v1.0)
1434281_atMm.260360Dda1NM_025600.166498
442.25517.925629.25196.2299.35
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005804
(v1.0)
Dda166498
001001