DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005808
GeneDdb2
Synonymsp48
Desc.damage specific DNA binding protein 2
LocusNM_028119 chr2:91051739-91077223(-)
DB links


Entrez 107986
MGI 1355314
Ensembl ENSMUSG00000002109
Vega OTTMUSG00000014414
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005733
(v2.0)
Ddb2NM_028119107986
11.066437.589258.97367.947958.0074615.1396.6519553.93597.4324614.6777
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005808
(v1.0)
Ddb2107986
Minor ZGA0.98692
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005733
(v2.0)
Ddb2107986
531/376-0.0148344/376-0.243840/3760.3582165/3760.142115/376-2.5127139/376-2.0232
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005733
(v2.0)
Ddb2107986
225/1110.5027123/1110.031636/1111.8664150/1111.74294/111-2.467842/111-1.9633
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005733
(v2.0)
Ddb2107986
56.544110852.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005733
(v2.0)
Ddb2107986
9.51255816.4
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005808
(v1.0)
Ddb2NM_028119107986
39.063140.76725.927765.538664.65979
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005808
(v1.0)
Ddb2NM_028119107986
152.497139.18522.97826.207518.6886
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005808
(v1.0)
Ddb2NM_028119107986
40.84414.0471144.478
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005808
(v1.0)
Ddb2NM_028119107986
39.867840.357939.9772
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005808
(v1.0)
Ddb2NM_028119107986
85.974454.0151
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005808
(v1.0)
Ddb2NM_028119107986
40.86783.9916843.8456
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005808
(v1.0)
Ddb2NM_028119107986
5.488195.34785.18739
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005808
(v1.0)
Ddb2NM_028119107986
69.646443.8359
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005808
(v1.0)
Ddb2NM_028119107986
19.77057.98114
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005808
(v1.0)
Ddb2NM_028119107986
75.9366.9367
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005808
(v1.0)
1425706_a_atMm.389334Ddb2NM_028119.5107986
230.025425.25111.100
0005808
(v1.0)
1436680_s_atMm.389334Ddb2NM_028119.5107986
271.8569.5177.9034.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005808
(v1.0)
A_52_P3825Ddb2NM_028119107986
11P0.8060.277P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005808
(v1.0)
Ddb2107986
010010