DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005815
GeneDdit4
SynonymsDig2
REDD1
Rtp801
Desc.DNA-damage-inducible transcript 4
LocusNM_029083 chr10:59412423-59414518(-)
DB links


Entrez 74747
MGI 1921997
Ensembl ENSMUSG00000020108
Featureprotein-coding
GO(BP)
  •   18 Terms
      response to hypoxia (GO:0001666)
      neuron migration (GO:0001764)
      apoptotic process (GO:0006915)
      brain development (GO:0007420)
      cell proliferation (GO:0008283)
      negative regulation of signal transduction (GO:0009968)
      negative regulation of intracellular protein kinase cascade (GO:0010741)
      negative regulation of peptidyl-threonine phosphorylation (GO:0010801)
      neuron differentiation (GO:0030182)
      negative regulation of TOR signaling cascade (GO:0032007)
      negative regulation of peptidyl-serine phosphorylation (GO:0033137)
      intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:0042771)
      protein complex disassembly (GO:0043241)
      negative regulation of glycolysis (GO:0045820)
      nerve growth factor receptor signaling pathway (GO:0048011)
      defense response to virus (GO:0051607)
      reactive oxygen species metabolic process (GO:0072593)
      positive regulation of neuron death (GO:1901216)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005740
(v2.0)
Ddit4NM_02908374747
18.098685.589277.1749125.377243.912123.76323.4356241.508197.924128.702
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005815
(v1.0)
Ddit474747
MGA0.98927
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005740
(v2.0)
Ddit474747
698/4680.0638356/468-0.5095137/4681.8023435/4681.221467/468-0.7379595/468-0.2524
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005740
(v2.0)
Ddit474747
389/2060.4026139/206-0.6795130/2062.8654411/2062.313831/206-0.6576295/206-0.0809
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005740
(v2.0)
Ddit474747
45.145618824.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005740
(v2.0)
Ddit474747
6.19691414.39
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005815
(v1.0)
Ddit4NM_02908374747
88.986353.650493.3169.37216.6766
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005815
(v1.0)
Ddit4NM_02908374747
104.85665.0635100.722185.71419.8566
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005815
(v1.0)
Ddit4NM_02908374747
93.04336.6188558.5337
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005815
(v1.0)
Ddit4NM_02908374747
90.819553.1117179.271
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005815
(v1.0)
Ddit4NM_02908374747
58.4375195.484
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005815
(v1.0)
Ddit4NM_02908374747
93.09746.5282196.618
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005815
(v1.0)
Ddit4NM_02908374747
86.3813163.535137.417
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005815
(v1.0)
Ddit4NM_02908374747
183.414151.417
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005815
(v1.0)
Ddit4NM_02908374747
205.476.93005
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005815
(v1.0)
Ddit4NM_02908374747
22.951338.1502
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005815
(v1.0)
20267L0534B10-3Mm.216975830413E08Rik74747
U031822NAP097267-0015830413E08Rik;TC869504Q9D3F7U,F,24.33734.27813.24434.02034.1273.92673.4265
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005815
(v1.0)
1428306_atMm.21697Ddit4NM_029083.274747
965.1752112.075569.71017.85123.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005815
(v1.0)
A_51_P245796Ddit4NM_02908374747
11P0.6930.169P
Proteome N/A