DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005829
GeneDdx19a
SynonymsDBP5
Ddx19
Eif4a-rs1
Desc.DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a
LocusNM_007916 chr8:113498891-113521723(-)
DB links


Entrez 13680
MGI 99526
Ensembl ENSMUSG00000015023
Vega OTTMUSG00000031897
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005754
(v2.0)
Ddx19aNM_00791613680
8.78657129.104198.55928.728726.285716.461611.6027191.56623.112811.6927
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005829
(v1.0)
Ddx19a13680
Minor ZGA0.97185
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005754
(v2.0)
Ddx19a13680
626/3860.1843419/3860.0021172/3862.3986678/3862.136716/386-2.4627153/386-1.9239
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005754
(v2.0)
Ddx19a13680
245/1190.5253148/1190.196990/1193.074279/1192.53566/119-2.079346/119-1.9359
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005754
(v2.0)
Ddx19a13680
51.440211345.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005754
(v2.0)
Ddx19a13680
8.88746413.89
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005829
(v1.0)
Ddx19aNM_00791613680
134.169137.02221.376718.24658.20298
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005829
(v1.0)
Ddx19aNM_001190786,NM_001190800,NM_007916,NM_17228413680
931.183859.347148.767117.14952.2297
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005829
(v1.0)
Ddx19aNM_00791613680
140.2863.21334149.494
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005829
(v1.0)
Ddx19aNM_00791613680
136.933135.646141.954
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005829
(v1.0)
Ddx19aNM_001190786,NM_001190800,NM_007916,NM_17228413680
1346.041120.19
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005829
(v1.0)
Ddx19aNM_00791613680
140.3683.16933155.691
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005829
(v1.0)
Ddx19aNM_00791613680
19.791517.617816.0176
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005829
(v1.0)
Ddx19aNM_001190786,NM_001190800,NM_007916,NM_17228413680
170.008155.404
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005829
(v1.0)
Ddx19aNM_00791613680
70.907417.9932
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005829
(v1.0)
Ddx19aNM_00791613680
4.677687.14959
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005829
(v1.0)
1417927_atMm.287901Ddx19aNM_007916.213680
671.8751080.3268096.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005829
(v1.0)
A_52_P587642Ddx19aNM_00791613680
11P1.740.123P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005829
(v1.0)
Ddx19a13680
15179364524