DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005838
GeneDdx28
SynonymsMddx28
Desc.DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
LocusNM_028038 chr8:108533516-108535386(-)
DB links


Entrez 71986
MGI 1919236
Ensembl ENSMUSG00000045538
Vega OTTMUSG00000031189
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005763
(v2.0)
Ddx28NM_02803871986
7.1138874.957511.015119.906422.864614.95527.1128911.507925.919413.589
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005838
(v1.0)
Ddx2871986
Maternal RNA0.97361
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005763
(v2.0)
Ddx2871986
629/3960.1544428/396-0.0041192/3962.5206379/3961.262623/396-2.0017183/396-1.7048
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005763
(v2.0)
Ddx2871986
341/1730.4639197/1730.0708180/1733.5685324/1732.22019/173-2.089247/173-2.4419
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005763
(v2.0)
Ddx2871986
80.990614954.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005763
(v2.0)
Ddx2871986
28.08859330.2
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005838
(v1.0)
Ddx28NM_02803871986
77.91817.6412214.816115.84795.14033
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005838
(v1.0)
Ddx28NM_02803871986
93.22018.2551916.554418.14235.92994
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005838
(v1.0)
Ddx28NM_02803871986
81.47052.601628.33673
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005838
(v1.0)
Ddx28NM_02803871986
79.52327.564498.52936
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005838
(v1.0)
Ddx28NM_02803871986
8.38229.56186
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005838
(v1.0)
Ddx28NM_02803871986
81.51782.565989.35472
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005838
(v1.0)
Ddx28NM_02803871986
13.717415.301817.9496
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005838
(v1.0)
Ddx28NM_02803871986
17.946321.0171
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005838
(v1.0)
Ddx28NM_02803871986
7.053346.79789
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005838
(v1.0)
Ddx28NM_02803871986
16.81634.4355
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005838
(v1.0)
20572L0704G12-32410004K13Rik71986
U030194NAP012703-0012410004K13Rik;TC893110,TC893109Q9CWT63.44213.27162.95913.49053.20163.33223.2968
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005838
(v1.0)
1428702_atMm.307515Ddx28NM_028038.371986
998.95301.925000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005838
(v1.0)
A_51_P219325Ddx28NM_02803871986
11P0.7950.397P
Proteome N/A