DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005845
GeneDdx41
Synonyms
Desc.DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
LocusNM_134059 chr13:55631771-55638019(-)
DB links


Entrez 72935
MGI 1920185
Ensembl ENSMUSG00000021494
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005770
(v2.0)
Ddx41NM_13405972935
16.636317.59569.7152629.392927.771160.628923.657414.769229.623166.7598
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005845
(v1.0)
Ddx4172935
Major ZGA0.96927
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005770
(v2.0)
Ddx4172935
800/5600.0018487/560-0.3171274/5602.5441720/5601.689419/560-2.7603199/560-2.0836
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005770
(v2.0)
Ddx4172935
390/2080.3924229/2080.0225264/2083.8687693/2083.05236/208-2.863974/208-2.068
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005770
(v2.0)
Ddx4172935
100.746218255.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005770
(v2.0)
Ddx4172935
31.670210929.06
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005845
(v1.0)
Ddx41NM_13405972935
18.28726.7405721.879219.217916.8297
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005845
(v1.0)
Ddx41NM_13405972935
192.16264.704202.536212.724156.102
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005845
(v1.0)
Ddx41NM_13405972935
19.1216.084057.3541
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005845
(v1.0)
Ddx41NM_13405972935
18.66396.6728810.9808
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005845
(v1.0)
Ddx41NM_13405972935
90.8403174.973
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005845
(v1.0)
Ddx41NM_13405972935
19.13216.0007212.0434
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005845
(v1.0)
Ddx41NM_13405972935
20.256818.555720.4768
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005845
(v1.0)
Ddx41NM_13405972935
293.344324.404
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005845
(v1.0)
Ddx41NM_13405972935
5.496936.82134
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005845
(v1.0)
Ddx41NM_13405972935
0.470540.620453
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005845
(v1.0)
6997H3040B02-3Mm.2050452900024F02Rik72935
U034819NAP096839-0012900024F02Rik;TC919518Q9CUY23.15193.15583.41893.29473.42113.35253.3542
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005845
(v1.0)
1423814_atMm.205045Ddx41NM_134059.272935
113.42500095.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005845
(v1.0)
A_51_P345927Ddx41NM_13405972935
11P1.4940.191P
Proteome N/A