DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005854
GeneDdx52
SynonymsROK1
Desc.DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
LocusNM_030096 chr11:83755592-83776588(+)
DB links


Entrez 78394
MGI 1925644
Ensembl ENSMUSG00000020677
Vega OTTMUSG00000000973
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005779
(v2.0)
Ddx52NM_03009678394
6.0622911.036712.208298.772988.181211.815731.10358.6192268.29913.9807
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005854
(v1.0)
Ddx5278394
Major ZGA0.99624
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005779
(v2.0)
Ddx5278394
640/4330.0508417/433-0.170166/4330.8691253/4330.5534169/4330.6951898/4330.4521
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005779
(v2.0)
Ddx5278394
288/1810.1564181/181-0.115562/1811.9849236/1811.700334/181-0.3456195/181-0.4886
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005779
(v2.0)
Ddx5278394
66.068911159.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005779
(v2.0)
Ddx5278394
20.62776233.27
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005854
(v1.0)
Ddx52NM_03009678394
11.46848.4428173.550161.032821.9852
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005854
(v1.0)
Ddx52NM_03009678394
29.332619.1107159.207138.16246.1145
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005854
(v1.0)
Ddx52NM_03009678394
11.99132.217049.21129
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005854
(v1.0)
Ddx52NM_03009678394
11.70478.358046.38097
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005854
(v1.0)
Ddx52NM_03009678394
39.325316.6023
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005854
(v1.0)
Ddx52NM_03009678394
11.99832.186686.99844
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005854
(v1.0)
Ddx52NM_03009678394
68.095958.929647.1877
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005854
(v1.0)
Ddx52NM_03009678394
345.448271.228
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005854
(v1.0)
Ddx52NM_03009678394
2.1328938.4051
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005854
(v1.0)
Ddx52NM_03009678394
2.439343.4658
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005854
(v1.0)
5664H3004H04-3Mm.278072700029C06Rik78394
U013098NAP121813-001TC881137,TC881133Q9CS33U,F,23.17573.18953.4973.69773.08583.46753.1691
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005854
(v1.0)
1434607_atMm.280544Ddx52NM_030096.278394
47.9547.125252.65143.325117.9
Agilent44K N/A
Proteome N/A