DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005860
GeneDdx6
SynonymsHLR2
mRCK/P54
p54
rck
Desc.DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
LocusNM_007841 chr9:44412975-44448814(+)
NM_001110826 chr9:44412975-44448814(+)
NM_181324 chr9:44412975-44448814(+)
DB links


Entrez 13209
MGI 104976
Ensembl ENSMUSG00000032097
Featureprotein-coding
GO(BP)
  •   1 Terms
      cytoplasmic mRNA processing body assembly (GO:0033962)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005785
(v2.0)
Ddx6NM_001110826,NM_007841,NM_18132413209
36.38746.5460410.300824.8522.640841.959351.2912.587122.139236.9221
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005860
(v1.0)
Ddx613209
Major ZGA0.98287
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005785
(v2.0)
Ddx613209
645/3470.3806389/3470.0485255/3473.1127803/3472.533110/347-2.9388103/347-2.3347
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005785
(v2.0)
Ddx613209
411/1730.7322201/1730.0997230/1733.9204667/1733.25951/173-4.411258/173-2.1471
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005785
(v2.0)
Ddx613209
49.441917528.25
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005785
(v2.0)
Ddx613209
14.339313510.62
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005860
(v1.0)
Ddx6NM_001110826,NM_007841,NM_18132413209
6.802067.1284218.485915.650335.8948
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005860
(v1.0)
Ddx6FR189896,FR212558,FR393190,NM_001110826,NM_007841,NM_18132413209
6.838916.0992416.192717.508130.3864
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005860
(v1.0)
Ddx6NM_001110826,NM_007841,NM_18132413209
7.1121813.30737.77727
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005860
(v1.0)
Ddx6NM_001110826,NM_007841,NM_18132413209
6.942197.056859.31821
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005860
(v1.0)
Ddx6FR189896,FR212558,FR393190,NM_001110826,NM_007841,NM_18132413209
5.249127.61492
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005860
(v1.0)
Ddx6NM_001110826,NM_007841,NM_18132413209
7.1163113.125110.2199
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005860
(v1.0)
Ddx6NM_001110826,NM_007841,NM_18132413209
17.11515.11115.2712
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005860
(v1.0)
Ddx6FR189896,FR212558,FR393190,NM_001110826,NM_007841,NM_18132413209
17.318817.1913
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005860
(v1.0)
Ddx6NM_001110826,NM_007841,NM_18132413209
5.666357.67854
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005860
(v1.0)
Ddx6NM_001110826,NM_007841,NM_18132413209
1.587031.13525
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005860
(v1.0)
4167C0917H01-3Mm.157743Ddx613209
U010397NAP092930-001Ddx6;TC864866O549793.09073.1123.10253.03873.06753.04683.064
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005860
(v1.0)
1424598_atMm.267061Ddx6NM_001110826.1,NM_181324.3,NM_007841.413209
74.725129.7184.675131.925162.375
0005860
(v1.0)
1434697_atMm.267061Ddx6NM_001110826.1,NM_181324.3,NM_007841.413209
74.075121.67591.7137.525160.025
0005860
(v1.0)
1439122_atMm.267061Ddx6NM_001110826.1,NM_181324.3,NM_007841.413209
0143.175000
0005860
(v1.0)
1447789_x_atMm.267061Ddx6NM_001110826.1,NM_181324.3,NM_007841.413209
0286000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005860
(v1.0)
A_52_P573497Ddx6NM_18132413209
11P0.4930.128P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005860
(v1.0)
Ddx613209
152213518922