DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005941
GeneDennd4a
Synonyms
Desc.DENN/MADD domain containing 4A
LocusNM_001162917 chr9:64658818-64767474(+)
DB links


Entrez 102442
MGI 2142979
Ensembl ENSMUSG00000053641
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
      Rab guanyl-nucleotide exchange factor activity (GO:0017112)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005867
(v2.0)
Dennd4aNM_001162917102442
2.3600118.415940.05222.58226.934551.511095.1540231.23056.826921.46182
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005941
(v1.0)
Dennd4a102442
Minor ZGA0.99393
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005867
(v2.0)
Dennd4a102442
639/3760.2517402/376-0.0197133/3762.0667646/3762.104729/376-1.6058219/376-1.373
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005867
(v2.0)
Dennd4a102442
316/1390.6682166/1390.1389108/1393.1296460/1393.035111/139-1.518870/139-1.5685
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005867
(v2.0)
Dennd4a102442
70.352214648.19
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005867
(v2.0)
Dennd4a102442
14.7138716.91
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005941
(v1.0)
Dennd4aNM_001162917102442
19.138327.633416.80844.803953.63165
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005941
(v1.0)
Dennd4aNM_001162917102442
337.555356.148253.90174.702953.7044
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005941
(v1.0)
Dennd4aNM_001162917102442
20.01080.86307930.1486
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005941
(v1.0)
Dennd4aNM_001162917102442
19.532527.355923.0886
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005941
(v1.0)
Dennd4aNM_001162917102442
231.843288.934
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005941
(v1.0)
Dennd4aNM_001162917102442
20.02240.85125725.3228
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005941
(v1.0)
Dennd4aNM_001162917102442
15.5624.638414.7136
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005941
(v1.0)
Dennd4aNM_001162917102442
34.368736.7336
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005941
(v1.0)
Dennd4aNM_001162917102442
17.076410.2678
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005941
(v1.0)
Dennd4aNM_001162917102442
3.431164.9916
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005941
(v1.0)
1435975_atMm.222473Dennd4aNM_001162917.1102442
312.275244.175259.925280.2185.825
Agilent44K N/A
Proteome N/A