DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005943
GeneDennd4c
Synonyms
Desc.DENN/MADD domain containing 4C
LocusNM_184088 chr4:86394459-86496506(+)
NM_001081014 chr4:86394459-86476071(+)
DB links


Entrez 329877
MGI 1914769
Ensembl ENSMUSG00000038024
Vega OTTMUSG00000007709
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
      guanyl-nucleotide exchange factor activity (GO:0005085)
      Rab guanyl-nucleotide exchange factor activity (GO:0017112)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005869
(v2.0)
Dennd4cNM_184088329877
11.499121.897136.602824.717419.0753.258646.5873729.356623.3114.553
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005943
(v1.0)
Dennd4c329877
Minor ZGA0.97584
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005869
(v2.0)
Dennd4c329877
701/4140.2464523/4140.2205364/4143.3777840/4142.34557/414-0.7922341/414-0.8763
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005869
(v2.0)
Dennd4c329877
387/1550.8033246/1550.5473342/1554.6383752/1553.58848/155-2.086794/155-1.3071
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005869
(v2.0)
Dennd4c329877
64.334516139.96
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005869
(v2.0)
Dennd4c329877
17.909410716.74
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005943
(v1.0)
Dennd4cNM_001081014,NM_184088329877
24.617227.71720.723315.0054.96114
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005943
(v1.0)
Dennd4cFR005077,FR383361,NM_001081014,NM_184088329877
137.57153.608117.78685.329725.591
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005943
(v1.0)
Dennd4cNM_001081014,NM_184088329877
25.73964.6153630.2398
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005943
(v1.0)
Dennd4cNM_001081014,NM_184088329877
25.124427.438724.8483
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005943
(v1.0)
Dennd4cFR005077,FR383361,NM_001081014,NM_184088329877
357.461203.217
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005943
(v1.0)
Dennd4cNM_001081014,NM_184088329877
25.75454.5521427.2528
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005943
(v1.0)
Dennd4cNM_001081014,NM_184088329877
19.186614.48818.1963
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005943
(v1.0)
Dennd4cFR005077,FR383361,NM_001081014,NM_184088329877
86.5727116.133
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005943
(v1.0)
Dennd4cNM_001081014,NM_184088329877
24.892912.4966
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005943
(v1.0)
Dennd4cNM_001081014,NM_184088329877
2.262447.76577
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005943
(v1.0)
1434846_atMm.273718Dennd4cNM_184088.1,NM_001081014.1329877
180.525404.675237.8120.575142.975
Agilent44K N/A
Proteome N/A