DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005946
GeneDennd6a
SynonymsFam116a
Desc.DENN/MADD domain containing 6A
LocusNM_001134465 chr14:27399036-27451585(+)
NM_145969 chr14:27399036-27447895(+)
DB links


Entrez 211922
MGI 2442980
Ensembl ENSMUSG00000040818
Featureprotein-coding
GO(BP)
  •   1 Terms
      positive regulation of cell-cell adhesion mediated by cadherin (GO:2000049)
GO(MF)
  •   2 Terms
      guanyl-nucleotide exchange factor activity (GO:0005085)
      Rab guanyl-nucleotide exchange factor activity (GO:0017112)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005872
(v2.0)
Dennd6aNM_001134465,NM_001285466,NM_001285467,NM_145969211922
8.5960829.94857.223620.36063.93884.643354.9145954.22883.3413.97575
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005946
(v1.0)
Fam116a211922
Minor ZGA0.96365
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005872
(v2.0)
Dennd6a211922
617/3680.2322413/3680.050182/3681.4057264/3680.847745/368-0.9584296/368-0.91
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005872
(v2.0)
Dennd6a211922
309/1640.399191/1640.103171/1642.3105217/1641.71999/164-2.01466/164-1.8885
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005946
(v1.0)
Fam116aNM_001134465,NM_145969211922
42.512451.044319.59063.807814.43162
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005946
(v1.0)
Fam116aFR287989,FR360311,NM_001134465,NM_145969211922
397.148607.54173.58651.986316.8331
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005946
(v1.0)
Fam116aNM_001134465,NM_145969211922
44.45063.7877855.6904
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005946
(v1.0)
Fam116aNM_001134465,NM_145969211922
43.388250.531752.0676
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005946
(v1.0)
Fam116aFR287989,FR360311,NM_001134465,NM_145969211922
878.973514.75
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005946
(v1.0)
Fam116aNM_001134465,NM_145969211922
44.47643.735957.106
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005946
(v1.0)
Fam116aNM_001134465,NM_145969211922
18.13783.676593.19439
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005946
(v1.0)
Fam116aFR287989,FR360311,NM_001134465,NM_145969211922
72.321947.6872
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005946
(v1.0)
Fam116aNM_001134465,NM_145969211922
24.71927.4158
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005946
(v1.0)
Fam116aNM_001134465,NM_145969211922
2.972765.22398
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005946
(v1.0)
10870H3104G03-3Mm.218363MGC38041211922
U015410NAP040283-1MGC38041;TC920809,TC920808,TC894706,TC795693U,F,22.71442.61282.41562.24172.28392.17282.297
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005946
(v1.0)
1437253_atMm.260512Fam116aNM_001134465.1,NM_145969.4211922
138.075146.95157.575020.2
0005946
(v1.0)
1451568_atMm.260512Fam116aNM_001134465.1,NM_145969.4211922
0067.82500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005946
(v1.0)
A_52_P186962A630054L15RikNM_145969211922
11P1.2860.322P
Proteome N/A