DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005951
GeneDepdc5
Synonyms
Desc.DEP domain containing 5
LocusNM_177786 chr5:33206370-33298949(+)
NM_001170567 chr5:33206370-33336882(+)
NM_001025426 chr5:33206370-33336882(+)
DB links


Entrez 277854
MGI 2141101
Ensembl ENSMUSG00000037426
Vega OTTMUSG00000028553
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005877
(v2.0)
Depdc5NM_001025426,NM_001170567,NM_177786277854
2.576677.8333414.103326.354512.88072.7008311.204512.778810.10752.10685
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005951
(v1.0)
Depdc5277854
Major ZGA0.94723
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005877
(v2.0)
Depdc5277854
568/3670.117427/3670.102106/3671.776205/3670.488338/367-1.1927302/367-0.8773
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005877
(v2.0)
Depdc5277854
258/1520.249171/1520.0534102/1522.9288192/1521.652111/152-1.644284/152-1.4386
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005877
(v2.0)
Depdc5277854
35.54688044.43
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005877
(v2.0)
Depdc5277854
14.66755725.73
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005951
(v1.0)
Depdc5NM_001025426,NM_001170567,NM_177786277854
8.144649.7798519.61168.91797.86373
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005951
(v1.0)
Depdc5FR205315,FR278783,NM_001025426,NM_001170567,NM_177786277854
83.234492.9938202.83389.8126101.239
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005951
(v1.0)
Depdc5NM_001025426,NM_001170567,NM_177786277854
8.515970.94231610.67
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005951
(v1.0)
Depdc5NM_001025426,NM_001170567,NM_177786277854
8.312439.681659.45795
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005951
(v1.0)
Depdc5FR205315,FR278783,NM_001025426,NM_001170567,NM_177786277854
169.29140.166
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005951
(v1.0)
Depdc5NM_001025426,NM_001170567,NM_177786277854
8.520920.92940910.3732
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005951
(v1.0)
Depdc5NM_001025426,NM_001170567,NM_177786277854
18.15738.610597.00973
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005951
(v1.0)
Depdc5FR205315,FR278783,NM_001025426,NM_001170567,NM_177786277854
85.011774.7936
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005951
(v1.0)
Depdc5NM_001025426,NM_001170567,NM_177786277854
8.082032.02342
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005951
(v1.0)
Depdc5NM_001025426,NM_001170567,NM_177786277854
0.1758180.0348911
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005951
(v1.0)
1458615_atMm.101524Depdc5NM_001025426.2,NM_001170567.1,NM_177786.4277854
00382.275137.250
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005951
(v1.0)
A_51_P313035Depdc5AK052458277854
11P0.460.093P
Proteome N/A