DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006143
GeneDnajc11
Synonyms
Desc.DnaJ (Hsp40) homolog, subfamily C, member 11
LocusNM_172704 chr4:151307829-151356068(+)
DB links


Entrez 230935
MGI 2443386
Ensembl ENSMUSG00000039768
Vega OTTMUSG00000010358
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006072
(v2.0)
Dnajc11NM_172704230935
20.083253.455213.07116.538228.105918.617911.8496240.97831.19321.8675
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006143
(v1.0)
Dnajc11230935
Maternal RNA0.99049
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006072
(v2.0)
Dnajc11230935
764/4420.2761476/442-0.0093824/4424.46231384/4422.970967/442-0.6562613/442-0.1272
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006072
(v2.0)
Dnajc11230935
380/1870.5079248/1870.2897799/1875.60731273/1874.08039/187-2.1989143/187-0.9789
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006072
(v2.0)
Dnajc11230935
104.090919453.66
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006072
(v2.0)
Dnajc11230935
31.027711526.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006143
(v1.0)
Dnajc11NM_172704230935
263.541148.33812.317519.4588.40926
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006143
(v1.0)
Dnajc11NM_172704230935
3756.082016.2129.513183.45470.9889
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006143
(v1.0)
Dnajc11NM_172704230935
275.5567.34455161.84
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006143
(v1.0)
Dnajc11NM_172704230935
268.97146.849178.652
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006143
(v1.0)
Dnajc11NM_172704230935
896.5541165.48
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006143
(v1.0)
Dnajc11NM_172704230935
275.7167.24395195.94
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006143
(v1.0)
Dnajc11NM_172704230935
11.404118.787421.7299
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006143
(v1.0)
Dnajc11NM_172704230935
100.311115.533
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006143
(v1.0)
Dnajc11NM_172704230935
54.67932.22802
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006143
(v1.0)
Dnajc11NM_172704230935
20.851611.1529
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006143
(v1.0)
6068H3015F06-3Mm.21353E030019A03230935
U005154NAP002923-002TC919561U,F,23.00933.26022.9752.92532.59182.94323.0165
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006143
(v1.0)
1433880_atMm.21353Dnajc11NM_172704.3230935
1794.2491.775272.075260.6479.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006143
(v1.0)
A_51_P398235Dnajc11AK053156230935
1 (0.896 to 1.134)1P0.825 (0.741 to 0.923)0.00053P
0006143
(v1.0)
A_52_P554506Dnajc11NM_172704230935
11P1.4280.21P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0006143
(v1.0)
Dnajc11230935
12022.50